Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00094 ATGTCTGAAATAGATTACACTAAGCTGCTAGCATTATTTTTCTGTGTTGCTTTCTTTGTATCTGTTGCTGCTGGAGATAGCGAAGCAAAAGCTCTGTTGAAGTGGAGAGCCAGCTTTAACGACCAAAGCAAAGCTATGTTGTCCACTTGGAAGAATGATACTAATCCTTGCAGGCAGTTGTGGAGGGGAATTTCTTGTGATGAATCCATGTCTGTGTCCAAGATAAGTCTCTCAAATCTTAATCTTCAAGGTACACTTTCCACTCTCAACTTCACTGCCTTTCCTAATCTCCTCCACTTCAACATAAGTCGCAACCAATTTTATGGATACATTCCCCACGAAATTGGTAAATTGTCCAGTATTGTGAGATTGGGTTTGTCAGATAATCCAATTAAGGGTCACATTCCTCCTGAAATCTGGAATCTAACCACTCTAAGTCGTCTTGATCTTAGCACATGCAATCTCACGGGAAAAATTGCCCATAAAATTGGGAATTTGAGGAATTTGAGGCTCCTATGGCTTGGAGAAAATTCCCTTTCTGGTCCCATTCCTGAAGAGATTGGAAGGTTGAGTAACCTTGTTGACCTTCGTTTGGGAACGAACACTTTGTCAGGTAGAATCCCATCATCAATTGGAAACTTGACCATGTTACAAATGCTTTATCTTTATCAGAACAATCTCTCAGGTCCCATTCCAGCTGAATTAGGAAAACTCTATCATCTCATTAACATTCAGTTATATGAAAATAAACTTTCGGGGCCAATCTCTCCTTCTATAGGAAACCTAACAAAGCTCGTACAATTGTCCTTCTCTAGTAACAGGCTTTCTGGTCCAATTCCTCCATCCATTGGCAACTTGATCAATTTAGATGATTTCCACCTTCGAAACAATAGTCTTTCAGGATTTATTCCTTCCACTATAGGAAATATCACAAAGCTCACCGTCCTTTACCTGGACAGCAACAATTTTAGTGGTCAACTTCCACGAGAAATGAATAACTTAACGAGTTGGCATAACATGCAACTGAGTTATAATCATTTTAGTGGTCCTTTACCACAAAAAATTTGTCAAAATGGCACGTTATCTGCCCTTGGTGCTAATGATAACCATTTCACTGGTCCTATTCCAACAAGTTTGAAGAATTGTTCTAGTCTAGAAAGACTTAGACTTGATAATAACCAAATAGTTGATAATATAACAGCTGCTTTTGGAGTATATCCTTATTTGAACTACATTGATCTTAGTGGTAATCAATTGTATGGCCACCTTTCATCCAAGTGGGGGAAGTGTCAAAATCTCACACAATTCATTATTCACAATAACAAGCTTTCTGGTGATATACCACCAGAAATAGGAGAGGCAACTAAACTTGGTTTACTTAACTTGTCTTCAAATCATTTGTCTGGACAAATTCCAAAACAACTAGAGAAGTTGATCATGTTGAGAAAACTCTCCTTGAGCAACAATAACTTCTCTGGTAATGTCCCCTCAAATATAAGATCACTTAGTCAGCTTGAAATTTTGGAGTTGGCAGAAAATAATTTCAATGGCTCAATCGCAAGAGAGCTTGGGGAATTAAAAATCTTAAGGGTCTTGAACTTGAGCAAAAACAAGTTTGATGAAAGCATTCCCCTTGAGTTTGGTGAACTCCAACACCTTGAACAACTTGATCTTAGTGGTAATTTGCTAAATGGGAAAATACCATCAAGGCTGGGAATGCTATCCAACTTGCAAGTATTGAACCTCTCACATAATAATTTCATTGGCACCATTCCTTTTGGTTTCAATGGATCAATGTCAGCTTTGTCTACAGTTGACATATCTTACAATCAATTAGAAGGCCCCATTCCAATCAAACCAGCCTTTCACAATTTTGATGCATTGAGGAATAACAAAGGTTTGTGTGGTAACATCACTGGTTTAAGTCCTTGTGATGATTTCCAAACATATGGACATGGGCATAAGAGCAAAAAGTTGTTGATAATACTCCTCCCATTAGTCGTACTGCTATTAGTAATTGTAGCAGCATCTTTCATTTGTTCTCGAATAGCAACAAAAACAAAAAACAAAGGTAGAGAAGCTCCACCAGAAGATGTTTATTTTGTGTGGAGTCTTGAAAGAAAAATATTGTATAGAGATATTGTTGAAGCCACAAGAGAATTTGATGAAAGATATCTCATTGACAAAGGGGGCCAAGGAAGTGTTTATAGGGTTGAGTTGCCTACAGGTGATGTTGTTGCTGTAAAGAAGCTTCATTCAATGCCAAGTGGGGAAATCTCCAACCAAAAAGCTTTTACAAGTGAGATCCAAGCTTTGACAGAAATCAAACATCGTAACATTGTGAAGCTTTATGGGTTTTATTCCAATTCACAATCCTCTATTTTAGTATATGAGTTCTTCGAAGGTGGCAGCTTGGATAACATACTAAAGAATGAGGAACAAGCCATTGAGTTTGGTTGGAACAAAAGGGTGAATGTTGTCAAAGGTGTGGCAAATGCCTTATTCCATATGCATCATGGTTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTCCTAAGTTCAGAATATGAAGAAGCTCACATCATTGACTTTGGAACATCAAAATTTTTGAATCCAAACTCAAGCAATATGACTAGATTTGCAGGCACATTCGGGTATGCTGCACCAGCGAATGAGAAATGTGATGTATACAGCTTCGGAGTGTTGACTTTAGAAATTATTATGGGTACACATCCTGCAGAGCTTATTTCATACTTGGCAGAGAAACCAACCAATAATGATTTGTTGTTAAGTGATGTGCTGGACCCACGACTTTCTCCACTCACAAAGCCAGTCCTAGATGATGTGATCTTAGTTGCAACAATGGCTTTTTCTTGCTTGAATGAGACTCCTCGGTCTCGTCCAACCATGGAAAAAGTATCTGCAGAGTTTGCAAAGACACCAAAATCTTATTCGGAGGACCAATTTCACGCCATCACAATTGGACAACTAATGAGGGATTGA 3018 0.3827 MSEIDYTKLLALFFCVAFFVSVAAGDSEAKALLKWRASFNDQSKAMLSTWKNDTNPCRQLWRGISCDESMSVSKISLSNLNLQGTLSTLNFTAFPNLLHFNISRNQFYGYIPHEIGKLSSIVRLGLSDNPIKGHIPPEIWNLTTLSRLDLSTCNLTGKIAHKIGNLRNLRLLWLGENSLSGPIPEEIGRLSNLVDLRLGTNTLSGRIPSSIGNLTMLQMLYLYQNNLSGPIPAELGKLYHLINIQLYENKLSGPISPSIGNLTKLVQLSFSSNRLSGPIPPSIGNLINLDDFHLRNNSLSGFIPSTIGNITKLTVLYLDSNNFSGQLPREMNNLTSWHNMQLSYNHFSGPLPQKICQNGTLSALGANDNHFTGPIPTSLKNCSSLERLRLDNNQIVDNITAAFGVYPYLNYIDLSGNQLYGHLSSKWGKCQNLTQFIIHNNKLSGDIPPEIGEATKLGLLNLSSNHLSGQIPKQLEKLIMLRKLSLSNNNFSGNVPSNIRSLSQLEILELAENNFNGSIARELGELKILRVLNLSKNKFDESIPLEFGELQHLEQLDLSGNLLNGKIPSRLGMLSNLQVLNLSHNNFIGTIPFGFNGSMSALSTVDISYNQLEGPIPIKPAFHNFDALRNNKGLCGNITGLSPCDDFQTYGHGHKSKKLLIILLPLVVLLLVIVAASFICSRIATKTKNKGREAPPEDVYFVWSLERKILYRDIVEATREFDERYLIDKGGQGSVYRVELPTGDVVAVKKLHSMPSGEISNQKAFTSEIQALTEIKHRNIVKLYGFYSNSQSSILVYEFFEGGSLDNILKNEEQAIEFGWNKRVNVVKGVANALFHMHHGCSIPIVHRDISSKNVLLSSEYEEAHIIDFGTSKFLNPNSSNMTRFAGTFGYAAPANEKCDVYSFGVLTLEIIMGTHPAELISYLAEKPTNNDLLLSDVLDPRLSPLTKPVLDDVILVATMAFSCLNETPRSRPTMEKVSAEFAKTPKSYSEDQFHAITIGQLMRD 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00094 1005 Pfam Leucine Rich Repeat 576 592 IPR001611 GO:0005515
Pral4119g00094 1005 SUPERFAMILY RNI-like 292 616 - -
Pral4119g00094 1005 Pfam Protein kinase domain 727 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00094 1005 Gene3D Ribonuclease Inhibitor 313 646 IPR032675 -
Pral4119g00094 1005 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Pral4119g00094 1005 FunFam Leucine-rich repeat receptor protein kinase MSP1 684 799 - -
Pral4119g00094 1005 ProSiteProfiles Protein kinase domain profile. 721 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00094 1005 Gene3D Transferase(Phosphotransferase) domain 1 800 999 - -
Pral4119g00094 1005 SMART LRR_typ_2 310 334 IPR003591 -
Pral4119g00094 1005 SMART LRR_typ_2 526 549 IPR003591 -
Pral4119g00094 1005 SMART LRR_typ_2 118 142 IPR003591 -
Pral4119g00094 1005 SMART LRR_typ_2 262 286 IPR003591 -
Pral4119g00094 1005 SMART LRR_typ_2 550 573 IPR003591 -
Pral4119g00094 1005 SMART LRR_typ_2 574 597 IPR003591 -
Pral4119g00094 1005 SMART LRR_typ_2 166 190 IPR003591 -
Pral4119g00094 1005 SMART LRR_typ_2 214 238 IPR003591 -
Pral4119g00094 1005 SMART LRR_typ_2 478 502 IPR003591 -
Pral4119g00094 1005 Gene3D Ribonuclease Inhibitor 25 177 IPR032675 -
Pral4119g00094 1005 SUPERFAMILY RNI-like 74 322 - -
Pral4119g00094 1005 SUPERFAMILY Protein kinase-like (PK-like) 699 979 IPR011009 -
Pral4119g00094 1005 FunFam Nuclear pore complex protein NUP107 25 183 - -
Pral4119g00094 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 335 648 - -
Pral4119g00094 1005 PANTHER LEUCINE RICH REPEAT KINASE 2 275 985 - -
Pral4119g00094 1005 Gene3D Ribonuclease Inhibitor 239 310 IPR032675 -
Pral4119g00094 1005 Gene3D Ribonuclease Inhibitor 178 238 IPR032675 -
Pral4119g00094 1005 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 229 329 - -
Pral4119g00094 1005 Gene3D Phosphorylase Kinase; domain 1 681 799 - -
Pral4119g00094 1005 ProSitePatterns Tyrosine protein kinases specific active-site signature. 845 857 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00094 Pral-Chr4119 761983 765112 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00094 5 895 Receptor kinase-like Gene Family AT4G08850 42.411 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4119g00094 Pkinase 7.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00094 - - pcin:129295243 1154.43