Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00090 ATGGCCTCCATGCCGTCAGAGACAGCGCACAACCATGAAACGTCGTCGTTTTTCGATTGTGCCTGTACTTGCTTTCTGTTTTGCTTCTTCGAGCAGGGAAGTTCCCTCAGCGAGCTTCACGAGGCGACAGCAGAGTTCGAGCGATTGAACTACAAATTGGCTTCGACATTGTCTGAATCAGATCAGGGAAAATGGAAACTAGGAGTGAATGAATCGTTTACTGTTTCGTACCTCATGAGTTCGCTGGGCTTGTCCCGCAAAGTAGCTACTGAAGTATCCAAAAAGGTTCAATTGAAAAACCCTGATAAACCCAATTCGGTGCTTAATCTTTTTAGGAGCTATGGATTCTCAGATACCCAGATATCTATAGTTGTGAAAATGCATCCACGAGTGCTTTCGGCTAACCCTGAGAAGACCCTTTTGCCTAAGCTAAGGTTTCTCCAGTCAATTGGGCTTTCGAGTTCTGAACTCCAAGATGTCCTCATTTCAAACTATTGTCTCCTCGGTATGAGCTTAGAACAATGTATAATCCCTTGTTTTGAGGCCCTTAGGAGTTTTCTCGACAATGATGAGGAAGCAAAAATAGCTTTAAAACGCTTTAAGTGGTTGCGTTCCCGCCAGGGCGTGACAAATTTAGCTCAAAATATTATGGTTTTGAGAGATATTGGAGTGCCCCGATCGTCTATCTCTCTACTGGCAACTAAATACATAGATTCAGCATTTCTGAATCATGCAAATTTTGTTGAATATGTCCAGTTTGCTAAGGAAGCAGGAGTTGATCCTTCCAAGTCTTTGTTCATTAATGCTGTTGCCGTTCTAGGACGCTTAAAGAAATCTACTTGGCAGTCGAAACTGGATATCTTCAAGAGGTATGGTTGGACCAGAGATGTCACTCTCTCAGTCTTCAGCAAACATCCACAATGCTTGATGCTGTCTGAGAAGAATATCACAAAGTCAATGTCATTTCTTGTGGATGAAGTGGGTATCCCGTTGGAAGGTATAGCTGCACGCCCAAAGTTACTTCATTATAGTTTGGAGCAGAGGATTATTCCTCGATACTCAGTAATTAAAGTTTTGAAAATGAAAGGTTTGGTAAAGAAGAATATCTCCTTCATTTCTATTGTCAGTTATACTGAGAAAAAGTTTGTAGAGAAATTTGTGACCAGATTTCACGAAAGTGTTCCTCAGCTATTGAACATCTATAAAGGTCCTTCAGGACGTTTATCCAAAGTTCAGTGA 1239 0.4149 MASMPSETAHNHETSSFFDCACTCFLFCFFEQGSSLSELHEATAEFERLNYKLASTLSESDQGKWKLGVNESFTVSYLMSSLGLSRKVATEVSKKVQLKNPDKPNSVLNLFRSYGFSDTQISIVVKMHPRVLSANPEKTLLPKLRFLQSIGLSSSELQDVLISNYCLLGMSLEQCIIPCFEALRSFLDNDEEAKIALKRFKWLRSRQGVTNLAQNIMVLRDIGVPRSSISLLATKYIDSAFLNHANFVEYVQFAKEAGVDPSKSLFINAVAVLGRLKKSTWQSKLDIFKRYGWTRDVTLSVFSKHPQCLMLSEKNITKSMSFLVDEVGIPLEGIAARPKLLHYSLEQRIIPRYSVIKVLKMKGLVKKNISFISIVSYTEKKFVEKFVTRFHESVPQLLNIYKGPSGRLSKVQ 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00090 412 Gene3D Transcription termination factor 3, mitochondrial 174 393 IPR038538 -
Pral4119g00090 412 SMART mt_12 331 362 IPR003690 GO:0003690|GO:0006355
Pral4119g00090 412 SMART mt_12 122 153 IPR003690 GO:0003690|GO:0006355
Pral4119g00090 412 SMART mt_12 158 189 IPR003690 GO:0003690|GO:0006355
Pral4119g00090 412 SMART mt_12 299 330 IPR003690 GO:0003690|GO:0006355
Pral4119g00090 412 Pfam mTERF 108 320 IPR003690 GO:0003690|GO:0006355
Pral4119g00090 412 Pfam mTERF 267 382 IPR003690 GO:0003690|GO:0006355
Pral4119g00090 412 FunFam Mitochondrial transcription termination factor-like 172 394 - -
Pral4119g00090 412 PANTHER CGI-12 PROTEIN-RELATED 71 389 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00090 Pral-Chr4119 673161 676199 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4119g00090 mTERF 3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00090 K15031 - cave:132171724 311.227