Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00081 ATGAAGAACAGTAACAATTCTCAGCAGAGAACCGGCGTCCGGCAGTACCACAAATCCGAGCTTCCCCGGCTCCGGTGGACGCCGGAACTCCACCAACACTTTGTTGAAGCCGTCGAAAGTCTCGGTGGTAAAGACAAGGCAACACCGAAGCGTATTTTGCAGATGATGCGTGTGAAAGGATTAAGGATCTCCCACGTTAAAAGCCATCTTCAGATGTACAGAAGCATGAAAGGGCATTCCATCATGTCACCAGTTCATCATCATCATCAAGAACATAAAGGAACAGCTTGTGCTAATGATCTGCGTATCTGCTCCATTTGCTTACCCCAAAGATCGCCGGGAGAAAAAGTTTTAACGCCAAAATATAGCAATAATGTAAAGAGAGAATTGCATCTGTTAGATATCAAAGGGCTTTCACAAAGTAGTGAAGAGATTTATTATGATCTCAACCAGGAGCCTTATACAACGACAAGTACAGAAAATAGTGGCACAGCTCCATTTGGTGACTACCCACTCTCTTTTGATCAGTCACATCTGTTTCCAGTAAATATGGTGCATAGTGGGAAAGAACAAGAAGAAGACGACGAAGACGAAAAGGATCAAGTCGTTCATGACTCTACTAGTTCAACACAGTCTCTTGGAAGGAATAATTACATAAACTTAGACCTAACTATCTGA 678 0.4292 MKNSNNSQQRTGVRQYHKSELPRLRWTPELHQHFVEAVESLGGKDKATPKRILQMMRVKGLRISHVKSHLQMYRSMKGHSIMSPVHHHHQEHKGTACANDLRICSICLPQRSPGEKVLTPKYSNNVKRELHLLDIKGLSQSSEEIYYDLNQEPYTTTSTENSGTAPFGDYPLSFDQSHLFPVNMVHSGKEQEEDDEDEKDQVVHDSTSSTQSLGRNNYINLDLTI 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00081 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 78 IPR017930 -
Pral4119g00081 225 MobiDBLite consensus disorder prediction 187 214 - -
Pral4119g00081 225 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 76 IPR006447 GO:0003677
Pral4119g00081 225 FunFam Myb family transcription factor 20 78 - -
Pral4119g00081 225 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 122 IPR046955 GO:0003700
Pral4119g00081 225 SUPERFAMILY Homeodomain-like 22 76 IPR009057 -
Pral4119g00081 225 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
Pral4119g00081 225 Gene3D - 21 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00081 Pral-Chr4119 609010 614938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00081 13 77 G2-like Transcription Factor Family AT2G42660 69.231 1.35e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4119g00081 Myb_DNA-binding 4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00081 - - pcin:129318851 298.901