Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00079 ATGCTTACTTATCTCATTGCCAGATTTTCTTCACTCTCCCGCGAGAGGAGGACCCACCTTGTTTCCCTTCATCAAAATGCCTCGCAAATTCTTAATTCCTTTTCTTCAGTTTCGAAATTCTCCGAATCAAATCAGCGGAAAGGAAAATCAGGAGAAACTAAAACTTGCACTGTTTCTTATCTTATAGACTCAGTGGGTATGTCCTCCGAAGTAGCTATCAAAGTATCCAAAGGGGTCAAACTAGAACGCCCTGATAGATCCAACTCGGTACTTGATCTTTTTAGGAGTTATGGATTCTCAGATTCCCAGATCTCTAAGGTTGTGGAGAAGTATCCGCGAGTCCTTTTGACAAAACCTGAGGTGACACTTTCGCCGAAGCTGAGGTTTTTCCGGTCTATAGGGTTTTCATGTCCTGAACTGCCAGAACTCATCATATATAACTCTGCACTCTTAGTTTTGAGCTTAAAGAAAAGTATCATTCCCCGATATGAAGCCCTTAAGAGCGTACTTGGAGATGATGCGAAAGCAAATATAGCTTTTAAACGCTGGGGTTGGTACCATAAGGACGTAAACAATTTACTTTCGAACATAAGAGTTTTGAGGGAACACGGAGTGCCTCAGTCTTCTGTCTCTCAACTGGTTACTCATTTTGCAAGAGCTGCGATTATAAAGCCGGCAAAGTTTGTTGAACATGTCAAGTTTGCTAAGGAGATAGGAATCCAGCCAACTAAGGTTGCGTTCGTCCATGCAATTTCTGTCTTAGCAATGACAAATAAATTGACCTGGGAGTCAAAGCTGGATATCTATGAAAGGTGCGGCTGGTCAAGGGATGCCACTCTGTCAGCATTCAGTAAGTTTCCACATTGCATGCTGCTGTCAGAGGATAAAATCACAAGCAAAATGAAGTTTTTCGTGGATGAAATGGGTTTGTCTTTGGAAGATATAGTTAATTGCCCAACAATTCTTGGCTATCGCTTGAAGCAAAGGATTATTCCTAGATTCTCAGTAATTAAAATTTTGAAAACTAATGGTTTGATGAAACGTGATAGGTCCTTACTTTCCATTATCATCTTAAGTGAAAAGAAGTTTTTGGAAAAGTTTGTAATCAGATTTCAGGAAAGTGTTCCTGAGCTGTTGGACATTTATAAAAGTGGTTCTTGA 1161 0.4022 MLTYLIARFSSLSRERRTHLVSLHQNASQILNSFSSVSKFSESNQRKGKSGETKTCTVSYLIDSVGMSSEVAIKVSKGVKLERPDRSNSVLDLFRSYGFSDSQISKVVEKYPRVLLTKPEVTLSPKLRFFRSIGFSCPELPELIIYNSALLVLSLKKSIIPRYEALKSVLGDDAKANIAFKRWGWYHKDVNNLLSNIRVLREHGVPQSSVSQLVTHFARAAIIKPAKFVEHVKFAKEIGIQPTKVAFVHAISVLAMTNKLTWESKLDIYERCGWSRDATLSAFSKFPHCMLLSEDKITSKMKFFVDEMGLSLEDIVNCPTILGYRLKQRIIPRFSVIKILKTNGLMKRDRSLLSIIILSEKKFLEKFVIRFQESVPELLDIYKSGS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00079 386 Gene3D Transcription termination factor 3, mitochondrial 64 180 IPR038538 -
Pral4119g00079 386 Gene3D Transcription termination factor 3, mitochondrial 181 374 IPR038538 -
Pral4119g00079 386 SMART mt_12 141 173 IPR003690 GO:0003690|GO:0006355
Pral4119g00079 386 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Pral4119g00079 386 SMART mt_12 28 68 IPR003690 GO:0003690|GO:0006355
Pral4119g00079 386 SMART mt_12 312 346 IPR003690 GO:0003690|GO:0006355
Pral4119g00079 386 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Pral4119g00079 386 SMART mt_12 245 275 IPR003690 GO:0003690|GO:0006355
Pral4119g00079 386 FunFam Mitochondrial transcription termination factor-like 155 375 - -
Pral4119g00079 386 PANTHER CGI-12 PROTEIN-RELATED 55 370 IPR003690 GO:0003690|GO:0006355
Pral4119g00079 386 Pfam mTERF 259 364 IPR003690 GO:0003690|GO:0006355
Pral4119g00079 386 Pfam mTERF 91 246 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00079 Pral-Chr4119 593394 594788 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4119g00079 mTERF 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00079 K15031 - gmx:100788793 317.775