Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00078 ATGTCTGCCAAAGCGGCTATTGAAATTTCCAAAAGGATTCATTTGAAATCCCCTTGTAAGCCCGATTCCGTTCTTAATCTTTTCCGTGGCTACGGATTCTCTGATTCACAGATATCCAAAATTGTGAAACTTAGTCCTGTTGTGCTTTCAGCTAATCCCGAGAAGACCATTTTGCCTAAGCTAAAGTTTTTCCAGTCTTTAGGGTTTTCATGTTCGGAGCTCCCAGGACTTCTCATGTCTCACTCTGTAATCCTGGACTGGAGCTTAAAGAATCGTTTAATTCCCTTTTGTGAGGCCCTCAAGAGTGTTCTTAATGACGACGAGAAAGTGAGAATAGCTTTAAGGCGGTCAAGATGGTTTCTAATCTACTGGGAGGTAAACAATTTAGCTCCAAACATGAAGGTTTTGACAGATCTTGGAGTTCCTCGATCTTCTATTTGTGCGCTGTTAACTGCATTGCCAAATGTAGCATTTATGAATCCTGCCAAATTTGTTGAATGCGTCAAGTCTGCTAATGAAGCAGGAATCGACCCTTCTAAGGTCGTGTTCATTCAAGCTATCATTGTTTTAGCACAGGTAAAGAAATCAAGCTGGGAGTCAAAACTGGATTTGTTTGAGAGGTTTGGCTGGTCCAGGAATGTCACTCTATCAGCATTCAGTAAGTTTCCACATTGCATGCTTCTGTCAAAAGAAAATCTCACAAGCAAAATGAAGTTTCTTGTGGATGAAATGGGTTGTTCGTTGGAAGATATAGCCGGATGCCCAACAATTCTTAGCTATAGCTTGAAGCGGATTATTCCGAGGTGGTCAGTTATTAAAACTTTGAAAATCAACGGCTTGGCTGCAGATGATAAATGGTCTTTACCTTACATTATCATTGTAAGTGAGAAGAATTTTCGGGAGAAATTTGTGATCAGATATCAGGAAATTGTTCCCCAGCTGCCGAAAATCTATAAAGATGAACTCAGAGCTTTATCTCAGGTCCAAAAGGAAAAAAAGCAACAACTCTGA 1011 0.4026 MSAKAAIEISKRIHLKSPCKPDSVLNLFRGYGFSDSQISKIVKLSPVVLSANPEKTILPKLKFFQSLGFSCSELPGLLMSHSVILDWSLKNRLIPFCEALKSVLNDDEKVRIALRRSRWFLIYWEVNNLAPNMKVLTDLGVPRSSICALLTALPNVAFMNPAKFVECVKSANEAGIDPSKVVFIQAIIVLAQVKKSSWESKLDLFERFGWSRNVTLSAFSKFPHCMLLSKENLTSKMKFLVDEMGCSLEDIAGCPTILSYSLKRIIPRWSVIKTLKINGLAADDKWSLPYIIIVSEKNFREKFVIRYQEIVPQLPKIYKDELRALSQVQKEKKQQL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00078 336 FunFam Mitochondrial transcription termination factor-like 89 311 - -
Pral4119g00078 336 PANTHER CGI-12 PROTEIN-RELATED 2 307 IPR003690 GO:0003690|GO:0006355
Pral4119g00078 336 Pfam mTERF 25 182 IPR003690 GO:0003690|GO:0006355
Pral4119g00078 336 Pfam mTERF 194 299 IPR003690 GO:0003690|GO:0006355
Pral4119g00078 336 Gene3D Transcription termination factor 3, mitochondrial 81 311 IPR038538 -
Pral4119g00078 336 SMART mt_12 248 278 IPR003690 GO:0003690|GO:0006355
Pral4119g00078 336 SMART mt_12 39 70 IPR003690 GO:0003690|GO:0006355
Pral4119g00078 336 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Pral4119g00078 336 SMART mt_12 216 247 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00078 Pral-Chr4119 590510 591520 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4119g00078 mTERF 4.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00078 K15031 - cave:132171571 281.567