Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00075 ATGCTAACTTTTCTGTTTGCAAGATTATCTTCGTCACTGCCGTGGTGGAGGACAGCCCAGTTAGGGTTTCTTCATCGCAATGCATCCCACATTTCCTGTTCGTTTTATTCAGTTGCGCAATTATCTCAGTCAAGTCGACCAGAACAAAGTAGAGATGGGGATCTTTCGTTTACGCAATCTTACCTCATGAACTCATGTGGCATGTCTGCCAAAGTTGCTGGTAAAGTATCTGAGAGGATTGAATTGAAGGACCCATATCAACCGGATTCGGTACTTAATATTCTGAGAAGCTACGGATTCTCAGATCCACAGATATCCAAGATTGTGACGTGCTATCCACGGGTGCTTTTGGCCAATCCTGAGCACAATATTTTGCCCAGGCTAAGGTTTATGCAGTCTGTGGGGTTCTCAGCTGCTGAAATCCCAGAACTCTTCTCGTATAACACTGCATTAGTGTTATATAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAAGTGTGCTTTATGATGATTGGAAAGTGAGGAGATGTCTAAAATGCTCTACTTGGAGTATTTGCTCCTATGATGTCAAAAATATCGGCCCAAACATAAAGGTTTTAAGAGATGAAGGAGTGCCTCAATCTTTGGTCTTTTTCCTGTTATCTAGACGTGCAAATGTAGCATTCATGAATCAATCAATTTTTGCAGAATATGTCAAGTTTGTCAAGGAAACAGGAGTCGAACCTTTCAAGATTGGGTTTGTTGAAGCACTTATAGTTGTAGCTCAGTTGCGTAAATCAACCTGGGAGTCGAAACTGGGTATCTTTAAGAGATTTGGCTGGTCCCAAGGTGTCACACTCATGGCATTTAGTAAGGTTCCAAATATCATGGCTATGTCAGAGAAAAAGATCTCAGACGCAATGAAGTTTTTCATAGATGAAGTGGGTTTGCGGTTGGAAGATATAGCTGGACGACCGAATATTCTTAGGCATAGCTTGAAGAAGAGGATTATTCCTAGATGTTCAGTAGTAAAAACTTTGAAAATGCAGGGTTTAATCAAGGAAAACGTGTCCATTCCTTACCTGATTAGTATGAGCGAGAAAAATTTTCAGGAAAATTTCGTGGTTAAATATCAGCAAAGTGTTCCTCAGTTACTGAAAATCTATAGGGGTGATTTTGGATTCTTACCTGATATTCAGGCCTAG 1194 0.4054 MLTFLFARLSSSLPWWRTAQLGFLHRNASHISCSFYSVAQLSQSSRPEQSRDGDLSFTQSYLMNSCGMSAKVAGKVSERIELKDPYQPDSVLNILRSYGFSDPQISKIVTCYPRVLLANPEHNILPRLRFMQSVGFSAAEIPELFSYNTALVLYSLEKRIIPHYEALKSVLYDDWKVRRCLKCSTWSICSYDVKNIGPNIKVLRDEGVPQSLVFFLLSRRANVAFMNQSIFAEYVKFVKETGVEPFKIGFVEALIVVAQLRKSTWESKLGIFKRFGWSQGVTLMAFSKVPNIMAMSEKKISDAMKFFIDEVGLRLEDIAGRPNILRHSLKKRIIPRCSVVKTLKMQGLIKENVSIPYLISMSEKNFQENFVVKYQQSVPQLLKIYRGDFGFLPDIQA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00075 397 PANTHER CGI-12 PROTEIN-RELATED 56 374 IPR003690 GO:0003690|GO:0006355
Pral4119g00075 397 FunFam Mitochondrial transcription termination factor-like 156 378 - -
Pral4119g00075 397 Pfam mTERF 92 312 IPR003690 GO:0003690|GO:0006355
Pral4119g00075 397 Pfam mTERF 260 367 IPR003690 GO:0003690|GO:0006355
Pral4119g00075 397 Gene3D Transcription termination factor 3, mitochondrial 148 380 IPR038538 -
Pral4119g00075 397 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Pral4119g00075 397 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Pral4119g00075 397 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Pral4119g00075 397 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Pral4119g00075 397 SMART mt_12 214 244 IPR003690 GO:0003690|GO:0006355
Pral4119g00075 397 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00075 Pral-Chr4119 570613 575137 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4119g00075 mTERF 2.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00075 K15031 - qsu:112035834 306.219