Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00073 ATGTCCGCTGAAGTTGCTGGTAAACTATCAAAAAAGATTGGACTAAAAGGCCCAGATAGACCCGATTCCGTACTTAGTCTTCTCAGAAGCTACGAATTCTCAGATGCTCAGATATCCAAAATTGTGAAAAGATATCCCCAGTTGCTTGCAGCAAGTCCTGAGCAGAATCTTTTGCCCAAACTGAGGTTTATCCGTTCTATAGGATTTTCAGCTTCTGAACTCCCAGAACTATTTTTTTCTAACCCTACATTACTATTTTGGAGCTTAGAGAAACGTATAATACCCCACTATGAGGCCCTTAAAAGGGTACTTGGTGATGATCGGAAAGTAAAGAGAGGTTTGAAAAGCTCATGGTGGAACGTTAGATCTTATAGTGTAACGAATATGGATCCAAACATAAAGGTCTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTCTCTACTCTGTTATGTAGAAATGCAAATTTAGTATTTATCAGTCAATCAAAGTTTGTTGAATGTGTCAAGTTTGTCAAGGAAACAGGAATTGAACCTTGCAAGGTTACGTTCATTGATGCATTTATAGTTGTTGCGCAGGTTGGTAAATCAACCTGGGAGTTGAAACTGGCTATCTTTGAGAGGTTGGGCTGGTCCAGGGATCTCACTATTATGGCATTCTGTAAGTTCCCAAATATCATGAAAGTGTCAGAGAAGAAACTTACAAACAATATGAAGTTTTTTATGGACGAAATGGGTTTGCCGTTGGGGGATATAGCTGGATGCCCGACACTTTTCAGCTATAGTTTAAAGAGGAGGATTATACCTAGATTGTCGGTAGTTAAAATTTTGAAAATGAAGGGTTTAATCAAGGCTAGTATGTCCATACTGGGAATGATTATTTTGAGTGAGAAAAAGTTTCGGGAAAATTTTGTGATCAGATTTCAGGAAAGTGTTCCTGAGCTACTGGAACTCTATGGCAGTGACTTGAGACCTTCACCTGATGTTCTGGCGCAGGCAGTTTCCTGA 1005 0.396 MSAEVAGKLSKKIGLKGPDRPDSVLSLLRSYEFSDAQISKIVKRYPQLLAASPEQNLLPKLRFIRSIGFSASELPELFFSNPTLLFWSLEKRIIPHYEALKRVLGDDRKVKRGLKSSWWNVRSYSVTNMDPNIKVLRDEGVPQSSVSTLLCRNANLVFISQSKFVECVKFVKETGIEPCKVTFIDAFIVVAQVGKSTWELKLAIFERLGWSRDLTIMAFCKFPNIMKVSEKKLTNNMKFFMDEMGLPLGDIAGCPTLFSYSLKRRIIPRLSVVKILKMKGLIKASMSILGMIILSEKKFRENFVIRFQESVPELLELYGSDLRPSPDVLAQAVS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00073 334 Gene3D Transcription termination factor 3, mitochondrial 118 310 IPR038538 -
Pral4119g00073 334 Gene3D Transcription termination factor 3, mitochondrial 3 117 IPR038538 -
Pral4119g00073 334 Pfam mTERF 195 299 IPR003690 GO:0003690|GO:0006355
Pral4119g00073 334 Pfam mTERF 25 180 IPR003690 GO:0003690|GO:0006355
Pral4119g00073 334 PANTHER CGI-12 PROTEIN-RELATED 3 305 IPR003690 GO:0003690|GO:0006355
Pral4119g00073 334 FunFam Mitochondrial transcription termination factor-like 89 311 - -
Pral4119g00073 334 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Pral4119g00073 334 SMART mt_12 75 107 IPR003690 GO:0003690|GO:0006355
Pral4119g00073 334 SMART mt_12 39 70 IPR003690 GO:0003690|GO:0006355
Pral4119g00073 334 SMART mt_12 216 247 IPR003690 GO:0003690|GO:0006355
Pral4119g00073 334 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00073 Pral-Chr4119 566268 567272 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4119g00073 mTERF 4.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00073 K15031 - gmx:100775533 276.944