Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00066 ATGGAGGATGAAAGCAGTAATATTATTAATACTGATAAGGTAGTGATGAATAAGAACAACATGATGAGATCATTAGAAGAAGATATTGAAGATCATCAGGGAGAAGAAGAGGAAGACGATGATGATGATGAGAGAAGGATGCTTCCTGGGTTCAGATTCCATCCAACAGATGAAGAACTGGTAGGGTTTTACCTGAGAAGGAAGGTCCAGAAGAAGCCCCTTCGTATCGAACTCATCAAACAAATTGATATCTACAAGTACGATCCCTGGGATCTCCCAAAGGCAAGCGGGAGCGTGGGGGAGAAGGAATGGTATTTCTTCTGCAAGAGAGGGAGGAAGTACAGGAACAGCATCAGGCCAAACAGGGTTACGGGGTCAGGCTTCTGGAAAGCCACGGGAATTGACAAGTCCATTTACGATAATGCCCTCACTCACTGCATTGGCCTCAAGAAGTCCCTCGTCTATTACAAGGGCAGTGCTGGCAAAGGAACCAAGACTGATTGGATGATGCACGAGTTCGCCTCCCTCCTAATAACCACCCTACTACCCCACCACCAGTCATCTTCAAGAAGCTGA 576 0.4618 MEDESSNIINTDKVVMNKNNMMRSLEEDIEDHQGEEEEDDDDDERRMLPGFRFHPTDEELVGFYLRRKVQKKPLRIELIKQIDIYKYDPWDLPKASGSVGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKSIYDNALTHCIGLKKSLVYYKGSAGKGTKTDWMMHEFASLLITTLLPHHQSSSRS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00066 191 Gene3D NAC domain 56 189 IPR036093 GO:0003677|GO:0006355
Pral4119g00066 191 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 44 173 - -
Pral4119g00066 191 Coils Coil 15 42 - -
Pral4119g00066 191 Pfam No apical meristem (NAM) protein 49 174 IPR003441 GO:0003677|GO:0006355
Pral4119g00066 191 ProSiteProfiles NAC domain profile. 47 191 IPR003441 GO:0003677|GO:0006355
Pral4119g00066 191 SUPERFAMILY NAC domain 46 174 IPR036093 GO:0003677|GO:0006355
Pral4119g00066 191 MobiDBLite consensus disorder prediction 30 44 - -
Pral4119g00066 191 MobiDBLite consensus disorder prediction 20 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00066 Pral-Chr4119 509858 513758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00066 34 173 NAC Transcription Factor Family AT1G26870 70.922 7.10e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4119g00066 NAM 5.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00066 - - pcin:129317195 266.159