Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00046 ATGGCGAATGAGAAGGATCATTATTACGATCAGTATGATCTTAACAATTTCTATTACAACCACCACCAGAACCTTGTTCAAGGGTTTGATCATCCTTCCTCACACGGTAGTACGAGCTTCACAGATTGCTTGAATGGTGGATTCATGGACTATAATACTCTCTCAAGAGCCTTTGACTTGTCTTGCTCATCAGCATCTGAAGTGATCTCGCCCTCCATTAACGATGAGCTCAATCCAAAGAAGCCAGCTGTAGTCACTAGTCCGACGACCACTGTAGGAGATTCTCAAGTGGGGCTCAATTCCTCTGTGTCCAATTCGTCTTCTAATAATGAAGCAGAAGAAGCTGTGGTAACAGAAGAAGACTCAGCCACCAAAAGCGTCAAGAAAGAGAAGGACCAAGATGCAGAAGAAATGTCTAAGAAAGAGAACAAGCCAAAAGGAGGGAATAAGAAAGAGAAAAAGCCAAGAGAGCCGCGTTTTGCGTTCTTGACTAAAAGTGAGGTCGATCACTTAGAAGATGGATACAGGTGGAGGAAATATGGGCAGAAAGCCGTCAAGAACAGTCCTTACCCAAGGAGTTATTACAGATGCACAAGTCAAAAGTGCAATGTGAAGAAGAGGGTGGAGAGGTCATTCCAGGATCCATCAATTGTGGTCACAACATATGAAGGACAGCACAACCACCATTGTCCGGCAACACTTCGCGGCAGCGCCAACGCTGCCATGATGTTATCATCGGCGGCGGCAGCACCGCCATCCCTTTTTGGTTCTTCACAGCTGGGAAGAACAGCCATGTTTCCCCAGGAACTTCTTTCTCAGTTTCTTCCAAGTTACCAGGGCGATGATCATCATCATCCTCATCACCACCAAAACCATCCCATGTTCCACCAAAACCCTAATAATAATACTCATCTTCACCAGCAGCAAGTCCCTCACGACCATGGCTTGTTGCACGACCTGTTACCTCCTTCTTCTTCATCCTTCCCTGGTAGACAACCATGA 1002 0.4601 MANEKDHYYDQYDLNNFYYNHHQNLVQGFDHPSSHGSTSFTDCLNGGFMDYNTLSRAFDLSCSSASEVISPSINDELNPKKPAVVTSPTTTVGDSQVGLNSSVSNSSSNNEAEEAVVTEEDSATKSVKKEKDQDAEEMSKKENKPKGGNKKEKKPREPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCNVKKRVERSFQDPSIVVTTYEGQHNHHCPATLRGSANAAMMLSSAAAAPPSLFGSSQLGRTAMFPQELLSQFLPSYQGDDHHHPHHHQNHPMFHQNPNNNTHLHQQQVPHDHGLLHDLLPPSSSSFPGRQP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00046 333 Gene3D WRKY domain 156 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4119g00046 333 SMART WRKY_cls 171 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4119g00046 333 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 83 299 IPR044810 GO:0003700
Pral4119g00046 333 MobiDBLite consensus disorder prediction 72 159 - -
Pral4119g00046 333 MobiDBLite consensus disorder prediction 118 159 - -
Pral4119g00046 333 ProSiteProfiles WRKY domain profile. 166 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4119g00046 333 SUPERFAMILY WRKY DNA-binding domain 164 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4119g00046 333 MobiDBLite consensus disorder prediction 276 333 - -
Pral4119g00046 333 MobiDBLite consensus disorder prediction 83 113 - -
Pral4119g00046 333 MobiDBLite consensus disorder prediction 293 309 - -
Pral4119g00046 333 Pfam WRKY DNA -binding domain 172 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4119g00046 333 FunFam WRKY transcription factor 57 157 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00046 Pral-Chr4119 382711 385216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00046 1 266 WRKY Transcription Factor Family AT4G18170 44.828 1.28e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4119g00046 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00046 - - aprc:113847247 301.212