LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4119g00045	ATGTCGACCAATAGTTCTTTGAATGTGCAGCTGTCTAAGAAGACGACATTTTTGGGTTTGAAACTATGGGTCTTAATTGGGATTGTTGTGTGTGCATTTATAGTCCTGATTCTTTGTATGTTATCTGTATGGGCGATGTTTTGGAGAAAGTCAAAGAGACCGCTGAACAAATACACTGCATCACAAATACCAAATGTGTCGAAAGAGATCAAGGTCGATAAGGTTGGAGTGCAGAGTTCTTATAGCCACCCAGAAAGTGTATATGTTCCCTTTCATGAGAAGGCTAGTGATAAGAATCCAGATAAGGCTTTAGTACGGTCAGGCATGAGCAAATCCAGTGATCCGGACAATGTGAGTCAGTGCAGTTCAATGTATCATCACGAGAGAAGAGGTAGTTCGATGTCAGGTGAGGATGGGAGCTCTGGGACATTCAAGAAGCAATCTGCATTATCATATGGTGGAATGGTGCCTGCCTCTCCTTTAATTGGTTTGCCAGAATTCTCTCATCTTGGGTGGGGCCACTGGTTTACGCTTAGGGATCTTGAACTTGCAACAAATCGATTCTCAGCAGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGAATGTTGATCAATGGAACCGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAGAAAGAGTTTAGGGTTGAAGTGGAGGCTATAGGCCATGTTCGACATAAGAATCTTGTACGCCTGCTTGGATATTGCATTGAAGGAGTTCACAGGATGCTTGTGTATGAGTATGTGAATAACGGTAACTTAGAGCAATGGTTACATGGGGCCATGCGCCAACATGGGACATTTACCTGGGATGCCCGCATGAAAGTTATAACTGGCACAGCCAAAGCGCTTTCATACTTACATGAAGCAATAGAACCGAAAGTTGTTCATCGTGACATAAAGTCTAGCAACATATTAATTGATGATGAGTTCAATGCAAAGGTTTCTGACTTCGGTTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATCACAACTAGAGTCATGGGAACATTTGGTTATGTGGCACCAGAGTATGCTAATACTGGTTTGTTAAATGAGAAGAGCGATGTTTACAGCTTCGGTGTTTTACTTCTCGAAGCGGTTACTGGAAGGGACCCTGTAGACTATGCCCGTCCTGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGCTTATGGTCGGTGCCAGGAGAGCCGAGGAAGTCATAGACCCATGCCTCGAAGTCAAACCATCAACACGGGAATTAAAACGTGCCCTTCTGGTTGCACTTAGGTGTCTTGATCCTGCTGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAAAATCCATTCCGAGAGGATCGAAGGAACCGAAAGGGCCACACTGCCAGCATGGAAATTGAAACCACAAAGGATCTTGCTGGTGGACGCAATGCTGAGAAATCTGGGGATTCTGAAAGCCATAAGCCAGAGGCAACTCAGAGAGTATGA	1536	0.4434	MSTNSSLNVQLSKKTTFLGLKLWVLIGIVVCAFIVLILCMLSVWAMFWRKSKRPLNKYTASQIPNVSKEIKVDKVGVQSSYSHPESVYVPFHEKASDKNPDKALVRSGMSKSSDPDNVSQCSSMYHHERRGSSMSGEDGSSGTFKKQSALSYGGMVPASPLIGLPEFSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYRGMLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTFTWDARMKVITGTAKALSYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKLMVGARRAEEVIDPCLEVKPSTRELKRALLVALRCLDPAAEKRPKMSQVVRMLEADENPFREDRRNRKGHTASMEIETTKDLAGGRNAEKSGDSESHKPEATQRV	511

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4119g00045	511	CDD	STKc_IRAK	194	460	-	-
	Pral4119g00045	511	Coils	Coil	208	228	-	-
	Pral4119g00045	511	MobiDBLite	consensus disorder prediction	110	142	-	-
	Pral4119g00045	511	SMART	serkin_6	188	467	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4119g00045	511	PANTHER	OS01G0323000 PROTEIN	1	483	-	-
	Pral4119g00045	511	MobiDBLite	consensus disorder prediction	98	142	-	-
	Pral4119g00045	511	ProSiteProfiles	Protein kinase domain profile.	188	446	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4119g00045	511	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	310	322	IPR008271	GO:0004672\|GO:0006468
	Pral4119g00045	511	Gene3D	Transferase(Phosphotransferase) domain 1	264	476	-	-
	Pral4119g00045	511	FunFam	Putative receptor-like protein kinase	170	263	-	-
	Pral4119g00045	511	FunFam	Putative receptor-like serine/threonine-protein kinase	264	474	-	-
	Pral4119g00045	511	Pfam	Protein kinase domain	190	457	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4119g00045	511	SUPERFAMILY	Protein kinase-like (PK-like)	172	460	IPR011009	-
	Pral4119g00045	511	ProSitePatterns	Protein kinases ATP-binding region signature.	194	217	IPR017441	GO:0005524
	Pral4119g00045	511	Gene3D	Phosphorylase Kinase; domain 1	170	263	-	-
	Pral4119g00045	511	MobiDBLite	consensus disorder prediction	453	511	-	-
	Pral4119g00045	511	MobiDBLite	consensus disorder prediction	488	511	-	-
	Pral4119g00045	511	MobiDBLite	consensus disorder prediction	453	481	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4119g00045	Pral-Chr4119	367780	372353	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4119g00045	19	462	Trihelix Transcription Factor Family	AT1G70460	39.644	2.52e-94	300

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Pral4119g00045		Pkinase	1.6e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4119g00045	-		-	gmx:100778444	831.632