Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00042 ATGGATGAACCCCTTCTCCCCAAAATACGAGGAGCGCTCGCAGAATCCTCAAGCAGGCCATCATCATCCCTAAGAGAACGCAACTCATCTTATATTGATCTTATCACTAATGAAGAAGTCATTCAGATCATTACCACACCAAAGACTAGCCCTTCTTATTTGAACTTCTTAGCCAACTTGAACAGAAGAAAGAAGATCGTCCATCGCTCACACTCTGCTCCCTCGGTTTTCACTTATGCCAGAGGAGACGGTCACGATCCCTTTGACCTCGGAATTTCACAAAAGACATCATCGACAATAGTAAGTCTGTCCTTTGTTGGCGTCATCTTGTATGTGGCAACTGGGGTTTTAGTTTACTTGATAAGTGGGAGTTTCAAGGGCAAATCCACGTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTGACTCTCTGCACAATAGGATATGGTGATATTGTCCCAGATACAGCATTCACCAAAATCTTTACCTGTGGGTTCATTCTGGTGGGTTTTGGATTCATCGGCATTCTGCTAAATGGCTTAGTCACCTACATTTGTGATAGACAAGAGGAAATGTTACTGAGTGCCATGGATGAGAATCGATTCAATACACTAGTTAGATCATATATGATAGATAAAGAAAAAGGAAGAATGAGGATAAGAACCAAAGTGGGTCTAGCTTTGGCTGTGGTTGTTTGTTGCATTGCTGTAGGGACAATTAGTGCTCGCTACCTTGAGAAGTTGGATTGGCTGGACAGTTTTTATCTGTGTGTTACTTCTGTTACAACAGTAGGTTATGGGGATTTTGCTTTTAGTACTGAGGGTGGAAGGTGTTTTGCATCATTATGGCTCTTGGTGAGCACATTGGCAGTCGGCAGGGCCTTTCTGTACCTAACTGAATACAGTATTGACAAGAGAAATCGGACTATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCGGATTTAGTGGCCGCTGACCTTGACAATGATGGATCAATCAGGAGCCAAGGATGGATTATAAGCAAGGATTGGACAAATTATTGA 1050 0.4257 MDEPLLPKIRGALAESSSRPSSSLRERNSSYIDLITNEEVIQIITTPKTSPSYLNFLANLNRRKKIVHRSHSAPSVFTYARGDGHDPFDLGISQKTSSTIVSLSFVGVILYVATGVLVYLISGSFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFIGILLNGLVTYICDRQEEMLLSAMDENRFNTLVRSYMIDKEKGRMRIRTKVGLALAVVVCCIAVGTISARYLEKLDWLDSFYLCVTSVTTVGYGDFAFSTEGGRCFASLWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSDLVAADLDNDGSIRSQGWIISKDWTNY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00042 349 Pfam Ion channel 108 185 IPR013099 -
Pral4119g00042 349 Pfam Ion channel 231 299 IPR013099 -
Pral4119g00042 349 Gene3D - 96 193 - -
Pral4119g00042 349 SUPERFAMILY Voltage-gated potassium channels 213 318 - -
Pral4119g00042 349 FunFam Two-pore potassium channel 2-like 202 326 - -
Pral4119g00042 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 134 322 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4119g00042 349 SUPERFAMILY Voltage-gated potassium channels 96 185 - -
Pral4119g00042 349 MobiDBLite consensus disorder prediction 1 25 - -
Pral4119g00042 349 FunFam Two-pore potassium channel 2-like 99 195 - -
Pral4119g00042 349 Gene3D - 194 324 - -
Pral4119g00042 349 PRINTS Two pore domain K+ channel signature 142 170 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4119g00042 349 PRINTS Two pore domain K+ channel signature 262 271 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00042 Pral-Chr4119 350801 352305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00042 67 344 Ion Channels AT4G18160 49.462 4.37e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00042 K05389 - qsa:O6P43_014787 431.024