Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00041 ATGGATGAACCCCTTCTCCCCAAAATACGAGGAGCGCTCGCAGAATCCTCAAGCAGGCCATCATCATCCCTAAGAGAACGCAACTCATCTTATATTGATCTTATCACTAATGAAGAAGTCATTCAGATCATTACCACACCAAAGACTAGCCCTTCTTATTTGAACTTCTTAGCCAACTTGAACAGAAGAAAGAAGATCGTCCATCGCTCACACTCTGCTCCCTCGGTTTTCACTTATGCCAGAGGAGACGGTCACGATCCCTTTGACCTCGGAATTTCACAAAAGACATCATCGACAATAGTAAGTCTGTCCTTTGTTGGCGTCATCTTGTATGTGGCAACTGGGGTTTTAGTTTACTTGATAAGTGGGAGTTTCAAGGGCAAATCCACGTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTGACTCTCTGCACAATAGGATATGGTGATATTGTCCCAGATACAGCATTCACCAAAATCTTTACCTGTGGGTTCATTCTGGTGGGTTTTGGATTCATCGGCATTCTGCTAAATGGCTTAGTCACCTACATTTGTGATAGACAAGAGGAAATGTTACTGAGTGCCATGGATGAGAATCGATTCAATACACTAGTTAGATCATATATGATAGATAAAGAAAAAGGAAGAATGAGGATAAGAACCAAAGTGGGTCTAGCTTTGGCTGTGGTTGTTTGTTGCATTGCTGTAGGGACAATTAGTGCTCGCTACCTTGAGAAGTTGGATTGGCTGGACAGTTTTTATCTGTGTGTTACTTCTGTTACAACAGTAGGTTATGGGGATTTTGCTTTTAGTACTGAGGGTGGAAGGTGTTTTGCATCATTATGGCTCTTGGTGAGCACATTGGCAGTCGGCAGGGCCTTTCTGTACCTAACTGAATACAGTATTGACAAGAGAAATCGGACTATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCGGATTTAGTGGCCGCTGACCTTGACAATGATGGATCAATCAGCAAGTCTGAGTTTGTCATATACAAGCTTAAGGAGATGGGGAAGATAGCTGAGAATGACATTCTACAAATAACCAAACAATTTGACACATTGGACAGTAGCCAATGTGGCAAGATTACTCTTGCTGACCTAATGGAAACTGCCTAA 1152 0.4236 MDEPLLPKIRGALAESSSRPSSSLRERNSSYIDLITNEEVIQIITTPKTSPSYLNFLANLNRRKKIVHRSHSAPSVFTYARGDGHDPFDLGISQKTSSTIVSLSFVGVILYVATGVLVYLISGSFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFIGILLNGLVTYICDRQEEMLLSAMDENRFNTLVRSYMIDKEKGRMRIRTKVGLALAVVVCCIAVGTISARYLEKLDWLDSFYLCVTSVTTVGYGDFAFSTEGGRCFASLWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKIAENDILQITKQFDTLDSSQCGKITLADLMETA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00041 383 PRINTS Two pore domain K+ channel signature 142 170 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4119g00041 383 PRINTS Two pore domain K+ channel signature 262 271 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4119g00041 383 FunFam Two-pore potassium channel 2-like 99 195 - -
Pral4119g00041 383 SUPERFAMILY Voltage-gated potassium channels 212 319 - -
Pral4119g00041 383 Gene3D - 325 383 - -
Pral4119g00041 383 FunFam Two-pore potassium channel 2-like 202 326 - -
Pral4119g00041 383 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 133 358 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pral4119g00041 383 SUPERFAMILY EF-hand 326 381 IPR011992 -
Pral4119g00041 383 Gene3D - 194 324 - -
Pral4119g00041 383 Gene3D - 96 193 - -
Pral4119g00041 383 ProSitePatterns EF-hand calcium-binding domain. 328 340 IPR018247 -
Pral4119g00041 383 SUPERFAMILY Voltage-gated potassium channels 96 185 - -
Pral4119g00041 383 Pfam Ion channel 108 185 IPR013099 -
Pral4119g00041 383 Pfam Ion channel 231 299 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00041 Pral-Chr4119 350801 353460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00041 67 381 Ion Channels AT4G18160 52.532 3.46e-109 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00041 K05389 - qsa:O6P43_014787 504.597