Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00002 ATGGGTCTAAATCTTCAAGGCTCAACTATGTTTCACCTTCTTCTTTCGTCATTTCTGATCTGCAGCTTGGTACACCTGCAACAACCTGCCTATGCCATTAAAAAGCCATACATTGTATACTTGGGATCACATTCTCATGGTCCAAAACCTTCCTCTGCTGATATGGACTTTGCCACAACTTCCCATTATAATTTCCTTGCCTCGGTCTTAGGAAGCCATGAAAGGGCCAAAGAAGCCATCTTTTACTCATATAACCGGCACATCAATGGCTTTGCTGCATTACTTGAAGATGATGAGGCAGCAGAGATCAAGAAAAATCCAAAAGTAGTGTCAGTGTTCTTGAGCCAATCGCATAAGGTGCATACAACCAGGTCATGGGAGTTTCTAGGACAAGAAAGAAACGGAAGAGTCAGAGCTGACTCAGCTTGGGTCAAAGGAAGATTTGGTCAAAATGTGATTATTGGCAGTCTCGACACCGGTGTTTGGCCAGAATCCAGAAGCTTCAGAGATGATGGGTACGGTCCCATTCCAAGGAAGTGGCGCGGTGGATCAAAATGCGAGCTTTATAGTCCACGTAACAGAACTCTTTGCAACAGGAAACTCCTTGGAGCAAAAACCTTCTACAAAGGGTACCAGATAAAACACGGGAGCCTTGACCATACAAGCGCTCGTGACTTTGCCGGACACGGAACCCATATTTTGTCAACGGCCGGCGGCAACTTCGTTCGAAAAGTAAGTGTTCTCAACAATGGGAATGGAACAGCCAAGGGAGGATCTCCAAGAGCTCGTCTTGCTGTGTACAAGGTTTGCTGGGGGAGTCATGGTTCTGAACGTTGCACTGATGAAGATCTGATATATGCTTTTGATCAAGCCATCGATGATGGCGTTGATATTCTCTGCGTTTCGCTTGGTTCGGCGACTCCTCTGCATATTGATGACTGGTCCATGGGTGGCATCTCCATAGGATCGTTCCATGCGGTTGCCAGAGGAATCGTGGTTGTTGTCCCGGCGGGCAATGACGGGCCAAAACTTCAGACTGTTTTCTCCGTGGAGCCTTGGATCTTCACTGTTGCTGCTGGCTCCATAGACAGAGAATTCAGCAGTAATATTACTCGTAGTAATGGCCAACGCTTTAAGGGCACAAGTCTTGCCCCGAACTCGTCATCTCAGAGGAACCCATTTGCATTTATGAAAAATGCAAAAACAATTATACCAGTAAGACCAGCTCCAAGAGTTTCTGCATTCTCAGCAAGGGGACCCAACATGATTTTTCCCTCAATTCTCAAGCCCGATCTAACTGCACCAGGCCAGGATATAATTGCTGCTTATTCACCTGTTGCAAGTCCTACAGGCCTAGATTCAGATGAAGCTCACTTTGACTATAATATTCTATCCGGAACTTCCATGGCATGTGCTCATGTTTCTGGTATTGCTGGTCTTCTAAAAAATCATCATCCTAATTGGAGTCCTGCAATGATCAAATCAGCAATCATGACCACTGCAAGCATACTGGATAACACCTTTAGACAGATTCTGGATCAACAGGATGGTCGAGTAGCAACTCCATTTCATTATGGTGCAGGCTTTGTCAGACCCAACCTTGCTATGGACCCTGGACTTGTTTATGATCTCAGCCCTTCTGATTACCTGAACTTTTTATGCTTTTCTCGTTACGAGGGAGTATTACTTCAAGTCTTTAATTATAATAGGCCATACAGATGTCCAAGGTCTTACAAACTAGAAGATTTTAATTACCCTTCTATCACATTGCCTTTTCTGGGTATGAAACCTGTAAATGTTACTCGTATGGTAACAAATGTTGGGCCTCCAAGTACGTACACTGTAAATGTCAAAGCCCCTCGAGGAGTTAAGGTTGTTGTTCTTCCAAGAACTTTGACTTTTCAGAGGACAAACCAAAAGAAGAGCTATATGGTTATTTTGCAGGCATCAAGTTTAGCCCAAACTTCAGACCCTTCATTTGGAGAGTTGACTTGGACTGATGGCAAGCACAAAGTGAGAAGTCCCATAGTAATCCCTCAATATGAGAAAATGGCTATATAG 2061 0.4435 MGLNLQGSTMFHLLLSSFLICSLVHLQQPAYAIKKPYIVYLGSHSHGPKPSSADMDFATTSHYNFLASVLGSHERAKEAIFYSYNRHINGFAALLEDDEAAEIKKNPKVVSVFLSQSHKVHTTRSWEFLGQERNGRVRADSAWVKGRFGQNVIIGSLDTGVWPESRSFRDDGYGPIPRKWRGGSKCELYSPRNRTLCNRKLLGAKTFYKGYQIKHGSLDHTSARDFAGHGTHILSTAGGNFVRKVSVLNNGNGTAKGGSPRARLAVYKVCWGSHGSERCTDEDLIYAFDQAIDDGVDILCVSLGSATPLHIDDWSMGGISIGSFHAVARGIVVVVPAGNDGPKLQTVFSVEPWIFTVAAGSIDREFSSNITRSNGQRFKGTSLAPNSSSQRNPFAFMKNAKTIIPVRPAPRVSAFSARGPNMIFPSILKPDLTAPGQDIIAAYSPVASPTGLDSDEAHFDYNILSGTSMACAHVSGIAGLLKNHHPNWSPAMIKSAIMTTASILDNTFRQILDQQDGRVATPFHYGAGFVRPNLAMDPGLVYDLSPSDYLNFLCFSRYEGVLLQVFNYNRPYRCPRSYKLEDFNYPSITLPFLGMKPVNVTRMVTNVGPPSTYTVNVKAPRGVKVVVLPRTLTFQRTNQKKSYMVILQASSLAQTSDPSFGELTWTDGKHKVRSPIVIPQYEKMAI 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00002 686 Gene3D Peptidase S8/S53 domain 405 549 IPR036852 GO:0004252|GO:0006508
Pral4119g00002 686 Gene3D Peptidase S8/S53 domain 151 362 IPR036852 GO:0004252|GO:0006508
Pral4119g00002 686 FunFam Subtilisin-like protease SBT1.5 151 377 - -
Pral4119g00002 686 Pfam Peptidase inhibitor I9 37 120 IPR010259 -
Pral4119g00002 686 Gene3D - 390 404 - -
Pral4119g00002 686 Gene3D - 363 388 - -
Pral4119g00002 686 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Pral4119g00002 686 PRINTS Subtilisin serine protease family (S8) signature 465 481 IPR015500 -
Pral4119g00002 686 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Pral4119g00002 686 CDD Peptidases_S8_3 118 502 IPR034197 -
Pral4119g00002 686 Pfam Subtilase family 149 527 IPR000209 GO:0006508|GO:0008236
Pral4119g00002 686 Pfam Fibronectin type-III domain 582 678 IPR041469 -
Pral4119g00002 686 ProSiteProfiles Serine proteases, subtilase domain profile. 125 536 - -
Pral4119g00002 686 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 382 IPR045051 -
Pral4119g00002 686 SUPERFAMILY Subtilisin-like 121 540 IPR036852 GO:0004252|GO:0006508
Pral4119g00002 686 Gene3D - 553 680 - -
Pral4119g00002 686 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 121 IPR037045 -
Pral4119g00002 686 FunFam Subtilisin-like protease SBT5.3 25 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00002 Pral-Chr4119 14886 18935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00002 35 678 Subtilisin-like Serine Gene Family AT4G21640 37.746 8.61e-141 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00002 - - lja:Lj4g3v1388200.1 644.81