Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4116g00005 ATGGGGTGTTGCGTATCCACAAGCAGTCGAAGTACTTGTAGTAGTAAGAGCAATGGCGACACGATCTCTCCATCTTGTTTGGAAGTAGGTTTCTGCGGGCAAAAGAGAACAAGGAGAACGTTCTCTGATCATGTCATTGCTCTTCAGAATCTGCCGTCCCTACCGAATCGAATTTTCACCAATGGAAAGAGCCGGACTTCTTGCATATTCACACAACAAGGCAAAAAGGGTATCAATCAGGATGCCATGATTGTATGGGAAGACTTTATCTCTGAGGATGCTATTTTTTGTGGTGTCTTTGATGGCCATGGTCCATATGGTCATGTTGTTGCGCGCAATGTGAGGGATACCTTGCCAGTAAAACTACTTTCATTTCTGCACTCTTGTGAATCAAAGAGAAATGGATCTGGCTCAGGCAAAGCTTGCTTCAAGGGGAATACTGATGATGGAGTCTGTGAGAAGGATTGTTCGGCCGAGGATGTAGTGAATTCTGTCTGGAGAGAAGCTTTCATGAAGGCTTATAAGGCAATGGACAAAGAACTTAGGTCCCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACGGCTGTCACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGAAACATTGGGGATTCTCGAGCAATCATGGGATCCAAAGACACCAATGATTCCATGGTGGCCATTCAGTTAACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGGATTAAACGGTGCAAAGGCAGAGTATTTGCATTGCAGGATGAGCCTGAGGTTCCCAGAGTGTGGTTGCCTTTCGATGACGCGCCCGGATTAGCCATGGCTCGGGCATTTGGAGACTTCTGCTTGAAGGAGTATGGTGTGATTTCCATACCTGAGTTTTCTTATAGGCTGCTTACCGACAAAGATCAGTTCATCGTTCTTGCCTCTGATGGGGTGTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTAGCTTCAGCACCGACTCGTTCGTCTGCTGCAAGGATTCTCGTGGATTCTGCAGCTCGGGAGTGGAAGCTTAAGTATCCAACGTCAAAGATGGATGACTGTGCTGTTGTGTGCCTGTTTTTGGATGGGAAGATGGACTCAGAATCTGATTATGATGAGCCCGGCTTTTCTTCAGCAACCATCCAGAGCAACCATTCTGGCAATCCGGTTGAATCAGATGACGGCCAGAAGTCCGAGCCTTCTCTGCACCGGAACTTCACCGTGAGATCTGCCGATGAAAACGAGACGTATGGAGGACTGCCGGTGGACGTGGAAGATGGAACAATGTCATCAGTGGAAGATCAGAACTGGTCAGGTTTGGAAGGTGTGACCCGTGTAAATTCACTGGTTCAGCTTCCTCGATTTTCTGAGGAAAGGCCAAACACTTGA 1416 0.471 MGCCVSTSSRSTCSSKSNGDTISPSCLEVGFCGQKRTRRTFSDHVIALQNLPSLPNRIFTNGKSRTSCIFTQQGKKGINQDAMIVWEDFISEDAIFCGVFDGHGPYGHVVARNVRDTLPVKLLSFLHSCESKRNGSGSGKACFKGNTDDGVCEKDCSAEDVVNSVWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDTNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSYRLLTDKDQFIVLASDGVWDVLSNEEVVEIVASAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEPGFSSATIQSNHSGNPVESDDGQKSEPSLHRNFTVRSADENETYGGLPVDVEDGTMSSVEDQNWSGLEGVTRVNSLVQLPRFSEERPNT 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4116g00005 471 Gene3D - 58 378 IPR036457 -
Pral4116g00005 471 MobiDBLite consensus disorder prediction 382 404 - -
Pral4116g00005 471 CDD PP2Cc 72 370 IPR001932 -
Pral4116g00005 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Pral4116g00005 471 MobiDBLite consensus disorder prediction 379 443 - -
Pral4116g00005 471 FunFam probable protein phosphatase 2C 52 57 373 - -
Pral4116g00005 471 MobiDBLite consensus disorder prediction 405 419 - -
Pral4116g00005 471 Pfam Protein phosphatase 2C 142 346 IPR001932 -
Pral4116g00005 471 SUPERFAMILY PP2C-like 58 372 IPR036457 -
Pral4116g00005 471 PANTHER PROTEIN PHOSPHATASE 66 368 IPR015655 GO:0004722|GO:0006470
Pral4116g00005 471 SMART PP2C_4 50 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4116g00005 Pral-Chr4116 25289 29353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4116g00005 1 471 PP2C-type Phosphatase Gene Family AT1G03590 68.134 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4116g00005 - - gmx:100798340 829.706