Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4115g00016 ATGGGTGGGACAAGATCTGCTTCTGAGTATAAAGGAGCAAAGATCTATGGACAATTTTTATTGGGACTTGTGTTGATCTGCACGATTCATTTTTCCCAAGCGGACACGAATCCTACTGACGTTTCTGCAATAAATAACTTTTATGCTGCGCTGGGCTTCCCTGTTCTCCCTGGGTGGGTTCCAAGTGGGGGAGACCCGTGCGGACAAGCATGGCAAGGCATTCAGTGTAATGGTTCAGATATACAGACAATAGTTCTGGTTGGTGCAAATTTGGGAGGCGAACTAGGTGATAGCTTGGGAACGTTTGTTTCTATAAAGAAAATAGAGCTAAGCAACAACCACATTGGGGGAAGTATTCCATCCAGCTTGCCAGTCTCCTTGCAAAATTTTTTTCTTTCAGATAACCAGTTCACTGGAAGTATTCCAACCTCTTTATCTACCTTGACTGAACTGACAGTCATATCTCTTAATGACAATCAATTATCAGGAGAAATCCCGGACGTATTTCAATCACTTACAAAATTGGTTAATCTAGATTTATCGAACAACAATTTAAGTGGGGAACTGCCTCCGTCTGCGGAGAATTTGTCAGCTTTGGCCTCCTTACATTTGCAGAACAATCAACTATCTGGGACCCTTGATGTTTTACAAGACCTTCCACTGAATGATTTGAATGTAGAGAACAACCAATTCAATGGACCAATTCCTCCAAAGCTTCTAAGCATCGCAAACTTCAGAAAAGATGGAAACCCATTTAATGTTAATGGCACTACAACTTCAGCCCCTCCCGCTCATTCTCCAGCAACAACATCACCAGGAACTGTGGTCTCTGGGGCCCCAACGACTGGACATGTGCCTACCAAACCAGCTGAAGGACCAACTGCATCAAAGGAATCAAGTTCTGGAAAAGCGAAAAAGAGCACCAAAAGGGTGGTTTGGATATCTATTGCAAGTGTATTGGGATTTATTATTTTGGTTTTGGCTCTCCTTCTCTTTACTCCAAGATGTAGTAGAAGGGAAAGGGCTGGCAGAATTTCTAAGCAACATCATATTGGAGCATATGGAGATGACAGACACAATCTTAGGAATCATGGGACTTCAGTCCAACCACTCAGTCAAACTGAGAAAGGACCAAAGGGAGCTGTTCTGAGAACAAAGGAAGATCATCAAGCAGAGACCAGGAGAGTAGAAGCTATACCCAGGTCACAAGATGAGCAAGGCAAAGATGTACGAAGAATGGGAACATTACCCAGGCCGGATGATCATGAGATAGACATGAGTGCATTGGATGCGTACTCATTACCTCCCCCTCCCCCTCCACCTCCCCCTCCACCTCCACCACCCCCTCCACCACCCCCACCACCTAAGGAGAAGGTGACTGCTGAGTCAGTTCCTTTCCCTCGAGGGGCTACGATCAATCCTTCTGCAAAAAAGCCAGTTTCTCCCACTTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACGAACAGCTTTTCTCAAGATAACCTTATAGGAGGAGGCATGCTAGGGAATGTGTACAGGGCAGAGCTGCCTGATGGGAAGCTACTTGCTGTGAAGAAACTGGACAAAAGAGCTTCTGAGCATCAAAAGGATCACGATTTTCTTGAACTGGTAAACAGTATTGACAGAATCAGGCATGCAAATATTGTTGAGCTTATCGGTTACTGCGCTGAGCATGGCCAAAGGCTGCTGATCTATGAGTACTGCAGTAATGGGTCACTGCAGGATGCACTGCATTCAGATGATGAGTTCAAAACAAGATTGTCATGGAATGCTCGCATTCGGATAGCCCTTGGGGCAGCCAGAGCTTTAGAGTATTTGCATGAGATCTGCCAGCCACCTGTTGTACACAGAAACTTCAAATCTGCCAATATTCTCCTCGATGATGATCTATCTGTGCGTGTTTCTGATTGTGGTTTGGCTCCCTTGATAACTTCAGGTTCTGTAAGTCAGCTCTCAGGGAACCTGCTAACAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCCGGAATTTACACACACCAGAGTGATGTGTACAGTTTTGGAGTGGTTATGTTAGAACTATTGACAGGCCGCCAGTCCTATGACAGGACACGCTCTCGGGGGGAGCAATTTCTAGTTAGATGGGCAATTCCCCAACTACATGACATTGATGCCTTATCAAATATGGTAGATCCTTCTCTCAGTGGAGATTATCCAGCCAAATCATTGTCAAACTTTGCAGACATTATTTCTCAGTGTGTTCAGTCGGAGCCAGAATTTAGGCCACCTATGTCGGAGGTTGTTCAATACCTACTAGATATGATAAGGAAGGAATCTCACAGAAATGGATCAAATGAAGATTGA 2373 0.4463 MGGTRSASEYKGAKIYGQFLLGLVLICTIHFSQADTNPTDVSAINNFYAALGFPVLPGWVPSGGDPCGQAWQGIQCNGSDIQTIVLVGANLGGELGDSLGTFVSIKKIELSNNHIGGSIPSSLPVSLQNFFLSDNQFTGSIPTSLSTLTELTVISLNDNQLSGEIPDVFQSLTKLVNLDLSNNNLSGELPPSAENLSALASLHLQNNQLSGTLDVLQDLPLNDLNVENNQFNGPIPPKLLSIANFRKDGNPFNVNGTTTSAPPAHSPATTSPGTVVSGAPTTGHVPTKPAEGPTASKESSSGKAKKSTKRVVWISIASVLGFIILVLALLLFTPRCSRRERAGRISKQHHIGAYGDDRHNLRNHGTSVQPLSQTEKGPKGAVLRTKEDHQAETRRVEAIPRSQDEQGKDVRRMGTLPRPDDHEIDMSALDAYSLPPPPPPPPPPPPPPPPPPPPPKEKVTAESVPFPRGATINPSAKKPVSPTFAKSFTIASLQQYTNSFSQDNLIGGGMLGNVYRAELPDGKLLAVKKLDKRASEHQKDHDFLELVNSIDRIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEICQPPVVHRNFKSANILLDDDLSVRVSDCGLAPLITSGSVSQLSGNLLTAYGYGAPEFESGIYTHQSDVYSFGVVMLELLTGRQSYDRTRSRGEQFLVRWAIPQLHDIDALSNMVDPSLSGDYPAKSLSNFADIISQCVQSEPEFRPPMSEVVQYLLDMIRKESHRNGSNED 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4115g00016 790 Gene3D Ribonuclease Inhibitor 37 260 IPR032675 -
Pral4115g00016 790 Gene3D Transferase(Phosphotransferase) domain 1 578 790 - -
Pral4115g00016 790 SUPERFAMILY Protein kinase-like (PK-like) 478 774 IPR011009 -
Pral4115g00016 790 MobiDBLite consensus disorder prediction 251 281 - -
Pral4115g00016 790 Pfam Protein tyrosine and serine/threonine kinase 503 774 IPR001245 GO:0004672|GO:0006468
Pral4115g00016 790 ProSiteProfiles Protein kinase domain profile. 500 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4115g00016 790 MobiDBLite consensus disorder prediction 251 304 - -
Pral4115g00016 790 MobiDBLite consensus disorder prediction 380 427 - -
Pral4115g00016 790 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 468 577 - -
Pral4115g00016 790 Gene3D Phosphorylase Kinase; domain 1 470 577 - -
Pral4115g00016 790 SUPERFAMILY Formin homology 2 domain (FH2 domain) 445 454 - -
Pral4115g00016 790 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 578 788 - -
Pral4115g00016 790 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Pral4115g00016 790 MobiDBLite consensus disorder prediction 349 363 - -
Pral4115g00016 790 MobiDBLite consensus disorder prediction 349 461 - -
Pral4115g00016 790 MobiDBLite consensus disorder prediction 432 460 - -
Pral4115g00016 790 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Pral4115g00016 790 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Pral4115g00016 790 SUPERFAMILY L domain-like 36 241 - -
Pral4115g00016 790 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4115g00016 Pral-Chr4115 55618 63951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4115g00016 31 786 Strubbelig Receptor Gene Family AT4G03390 62.630 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral4115g00016 PK_Tyr_Ser-Thr 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4115g00016 - - gmx:100811490 1122.84