Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4114g00030 ATGGACGAAGGCCTCGAAGGACCACCAAATAGAGAACTCTATGCACTCTTAAACTTGTCGCCGGATGCCTCCGATGAAGAAATCCGAAGAGCTTATCGTCAATGGGCACAAGCCTATCACCCTGATAAATACCAAGCTCCCCACATGAAAGACATTGCTACTGCAAACTTCCAACGTATTTGTGAAGCGTATGAAGTTTTGTCGGATCCAAATAAAAGGCAAATATATGACATATATGGCATGGAAGGTTTGACATCTGGCCTGGAACTTGGTTCGAAGCTGGATAAAGCAGAAGAGATAAAGGCTGAATTGGAGAGACTACGGCGAATGAAGGAGATACAAAAGATATCGGCACATTTTAGAACTTCTGGTGCAATTCTGGCCAATATGTCTTTGCCACACTGTCTAAATGGTGATGGCATCATGAGAGGGATGTCTATGACCAGCGAAGTTCAGTCTCAATTATCAAAACGTAGTAGTGTTGCAATTGGTGGCAATTTAGCAGTTAATGGCGATTCAGGTGGTGGGGTTGCTACTGCCTTGTTTAGGCATGAAATTTCAGAAGTTTCTTCTATAGAGTTTATGGCTTCAGCTGGGTTGCGAGCACTAATAGGGGTGCAAACAACACGTCAATTATCAGCACATTCATCTGCTACAATGGGCCTTGCTATGTCTTTGCAAGATGGTTCATTGAATCTTTCTAATTCATGGAATCGCCAACTGTCAGACACAGCAAGTGGACATATACAACTTGCTTTAGGGCCACATTCATCTATAGCTGTAGGGTGGCAAAAGAAAGACGAGAAAAGATCTGCCTCAGGAGAAGTGAAGTTTGGCACAAGTTCTTTTGATGTAGGAGCTCATTATACTCATCACTTGTCTTCTAAATCTCATGGCCGCATTGCAGGCAGGATTGGGAGTTCAACCCTTGAGATTGAAATTGGGGGTGGGAGGAAGTTATCCAAATTTAGCACTGTCCGCTGGTTGTATACGATAGGAATTCAGGGTATTATTTGGAAATTTGAGCTGCATCGTGGTGGCCAAAAGTTAATTATCCCTATTTTGCTGACCAGACATTTGAACCCTGTCTTTGCGAGTGGGGCACTGATTATTCCAGCATCTCTCTACTTCCTTTTGAAGAAATTTTTAATCAAACCCTATTACCTTAAAAGGAATAAGCAGAAGGCTCTAGAGAATGCAGAGAAAACTTCTTCTCAGGTTCAAGAAGGTAGGGCCGCAGCAGAGAAAGCTCAGCAATTACAACAAACTGTTGCTAATAGGAAAAAAAGTAAGCAATTAGAAACAGGCGGACTAGTTATTACCAGAGCGCTATATGGAAACCACGTTATCCTGAGCAAGATAAATGCATCAAGTGCATCAAGTCGTGAATCAGCTTCAGAAGTTATAGATGTTACAATACCTCTCAATTTCCTTGTTAGTGATTCTGGCCAACTCAAGCTTCACGAAGGTGTAAAAAAATCAGGCATCATGGGCTTTTGTGATCCATGCCCAGGAGAACCTAAAAAGTTGTATGTAGAGTACTCTTACGCTGGCAACCAATACAAGGTCCTGGTTGATGATTATGAAGAGTTATTGATCCCCCGCGGCGCCCACAGGATTTGA 1623 0.4258 MDEGLEGPPNRELYALLNLSPDASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATANFQRICEAYEVLSDPNKRQIYDIYGMEGLTSGLELGSKLDKAEEIKAELERLRRMKEIQKISAHFRTSGAILANMSLPHCLNGDGIMRGMSMTSEVQSQLSKRSSVAIGGNLAVNGDSGGGVATALFRHEISEVSSIEFMASAGLRALIGVQTTRQLSAHSSATMGLAMSLQDGSLNLSNSWNRQLSDTASGHIQLALGPHSSIAVGWQKKDEKRSASGEVKFGTSSFDVGAHYTHHLSSKSHGRIAGRIGSSTLEIEIGGGRKLSKFSTVRWLYTIGIQGIIWKFELHRGGQKLIIPILLTRHLNPVFASGALIIPASLYFLLKKFLIKPYYLKRNKQKALENAEKTSSQVQEGRAAAEKAQQLQQTVANRKKSKQLETGGLVITRALYGNHVILSKINASSASSRESASEVIDVTIPLNFLVSDSGQLKLHEGVKKSGIMGFCDPCPGEPKKLYVEYSYAGNQYKVLVDDYEELLIPRGAHRI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4114g00030 540 SUPERFAMILY Chaperone J-domain 9 83 IPR036869 -
Pral4114g00030 540 Coils Coil 90 117 - -
Pral4114g00030 540 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Pral4114g00030 540 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Pral4114g00030 540 SMART dnaj_3 11 72 IPR001623 -
Pral4114g00030 540 Coils Coil 397 417 - -
Pral4114g00030 540 Gene3D DnaJ domain 8 104 IPR036869 -
Pral4114g00030 540 CDD DnaJ 12 69 IPR001623 -
Pral4114g00030 540 PANTHER CHAPERONE PROTEIN DNAJ 13 1 540 IPR042162 -
Pral4114g00030 540 Pfam DnaJ-like protein C11, C-terminal 386 534 IPR024586 -
Pral4114g00030 540 PRINTS DnaJ domain signature 52 72 IPR001623 -
Pral4114g00030 540 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pral4114g00030 540 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pral4114g00030 540 PRINTS DnaJ domain signature 72 91 IPR001623 -
Pral4114g00030 540 Pfam DnaJ domain 13 77 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4114g00030 Pral-Chr4114 166782 177481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4114g00030 14 77 C2H2 Transcription Factor Family AT1G74250 46.970 1.74e-08 55.5