Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00183 ATGTCCGCAGTAGTTGAAGATGCAATAATAAGATCGAAGAAAATATCAACGGGAAGAGCTCCTTGCTGTGACAAAGTGGGTCTGAAGAAAGGAAGATGGACTGCTGAGGAAGACAAAATCCTGACCGACTATATCCAGCAGCACGGCGAAGGCTCTTGGAGATCCTTGCCCAAAAATGCAGGGTTATTGAGGTGTGGAAAGAGTTGCAGACTGAGATGGATCAACTATTTGAAAGAAGACGTGAAGAGAGGCAACATTACTCCTCAGGAAGAGGCCATTATTGTGAAGCTTCATGGGGTGATCGGTAACAGGTGGTCTGTAATAGCAAGGCATCTACCAGGAAGAACAGATAATGAGATAAAGAATTATTGGAACTCTCATTTGAGAAGAAAAATTTACTGTTTCATGAGACCCTCAAATTCCAACGACAATCTCCCACCAATCGACATTGCTGCCCTGAACGCGGCTGCTTCATCCAAACGAGGAAGAGGTGGTCGAGGCAGACCAACTCAAGCAGCCATGCAAGAGGAGGACAAGAAAAATATCACTCGAAACCAATGCTCCCACTCAGATATGAATGCTGACGATCCGATTGACAAAATGCATCAAAGAAAAGCAAACCCCGATGAAGCTGAGGCAATTTCAATGATGGGCTCTAGCTCTTGGAGCCAGAGTCACCAAGAAGAGACCGTTGATGGAATTGGTTTGGATGCATATTGTGAGATGAGTAGTGATGATACACATGGCAACGCAGCATTTTGCCCCAACGTGGATGGAGAAGGTGACGCCTTGGGACCATTTCAATGGCTAGATGATGAAATAATGAAACTTAATTACATGTTTGAAAGTGGGATTCTTGTGAACTCAACCAGTAGTGGAAATAACAGTATGGGAGGAGAATGTGGCTATGGAATGGTTGGTGGTAATAAGGAGATGAATATTCCAACAAGCGAGGAAAGTAAAAGTGATGTTTGGAGCTCACTTTCAAATTACACAGAGAGTGGGCAGTGGTATAACAGTAACAACAATAATAATTATAATAGCAGAAGTTCATCATCAGGGAATTCTGTTTATGATTATCAGTGGGCTGATTGGGATATTTCAGCCAGTGCCCAATCCCATAATCAATGGAACCCGCAGTACTCCGAAGAAAGCGAGATGATGACTTGTTTGTGGGATGCCACTGCAAATGGTGAAGTAAATAACTTCTACTGA 1215 0.4329 MSAVVEDAIIRSKKISTGRAPCCDKVGLKKGRWTAEEDKILTDYIQQHGEGSWRSLPKNAGLLRCGKSCRLRWINYLKEDVKRGNITPQEEAIIVKLHGVIGNRWSVIARHLPGRTDNEIKNYWNSHLRRKIYCFMRPSNSNDNLPPIDIAALNAAASSKRGRGGRGRPTQAAMQEEDKKNITRNQCSHSDMNADDPIDKMHQRKANPDEAEAISMMGSSSWSQSHQEETVDGIGLDAYCEMSSDDTHGNAAFCPNVDGEGDALGPFQWLDDEIMKLNYMFESGILVNSTSSGNNSMGGECGYGMVGGNKEMNIPTSEESKSDVWSSLSNYTESGQWYNSNNNNNYNSRSSSSGNSVYDYQWADWDISASAQSHNQWNPQYSEESEMMTCLWDATANGEVNNFY 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00183 404 MobiDBLite consensus disorder prediction 159 181 - -
Pral4104g00183 404 Gene3D - 87 132 - -
Pral4104g00183 404 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Pral4104g00183 404 Gene3D - 27 83 - -
Pral4104g00183 404 CDD SANT 32 77 IPR001005 -
Pral4104g00183 404 CDD SANT 87 128 IPR001005 -
Pral4104g00183 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
Pral4104g00183 404 SMART sant 82 130 IPR001005 -
Pral4104g00183 404 SMART sant 29 79 IPR001005 -
Pral4104g00183 404 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Pral4104g00183 404 Pfam Myb-like DNA-binding domain 30 77 IPR001005 -
Pral4104g00183 404 Pfam Myb-like DNA-binding domain 83 128 IPR001005 -
Pral4104g00183 404 SUPERFAMILY Homeodomain-like 27 124 IPR009057 -
Pral4104g00183 404 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 18 239 - -
Pral4104g00183 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Pral4104g00183 404 FunFam Myb transcription factor 27 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00183 Pral-Chr4104 1206287 1210932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00183 18 277 MYB Transcription Factor Family AT5G49330 48.507 6.88e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4104g00183 Myb_DNA-binding 4.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00183 K09422 - gmx:100805532 372.089