Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00181 ATGGGAGTTGAGAAAGAAGGAACAAAAAGTGGAGGAGGACACGTCGGTGGGTTTTTCCAGTTGTTTGACTGGACCTCAAAATCTCGGAAGAAATTGTTTGCTTCTAAGTCAGACGCACCAGAATCTTTGAAGCAGGGGAAAAAAGTTGATGCCAGCTTAGCAATGACACGGCCTTATGTGGGGGTGAATGAAGATGAAATTGGAGCCGGTGCAAGTGTCAGAGGAAGTGATCATAGTTATGCTTCATCAGTTACAGATGATGAAGCATGTGGAACAAGAGTCCCAGGCGTCGTTGCTCGGCTTATGGGATTAGATTCTCTACCCCCTTCTGGTTTTCCTGAGCCCTATTCTTCTCCATATTTTGATGCCCGATCTCTTCAAGATGCTCAATATTGCAGGAAAAACCTGAGCTACCAGCATGATCAGGCCATTTATTCTGGAAATTTGCTTGAAAAATTTGAGGGCTCTTCAAGGAACTTCGTGGAACAAAGGTCCCAAAAGATCCTTAGCAGGCCAATTGAGAAGTTCCAAACCGAAGTATTGCCACCTAAGTCAGCTAAATCAATTCCTGTCACACACCATAAGCTTTTGTCACCTATCAAGACTCCTGGCTTTATTCCAAGCAACAATCCTGCTTATATAATGGAAGCGGCTGCAAGGATTATTGAACCTGGGCCCCAGGCTACTGCAAAGCCTAAAACTCCATCGATAGCTTCATCTTCTGTATCATTGAAGGTTCGAGGTCTTAAAGAAAAAGCAGAGGCTTCACAAAAAGGATCTCTTTCTGGATTATCTACCATGACATCTAGAGCCAGAGATTTGAAAGAAAAAAGAGAGGTTTCTCAAAGAACAATTAGGCTTTCTGAACCTTCTCAAAAAATGGTTGAGTCAAATGCTGTCAAGTATCTAAAGGGACAGTCTTTAAACAAAAGTTGGAATGGATCTCTGGATTCATCCAATGGATCTACTGATGCAGGAGAAGATTTATCTTTACAGAATAAAGGAAAGTCTGTTTCTCTTGCAATTCAAGCAAAAGTGAATGTTCAAAGGCGGGAAGGCTTGAGTTTGAATGGCAGTAGAGGTTTGGCGGGCCAGAAAGAACACCATGAGCCTAAAACCAACCCACCATCAAAGACTAAGGCTCAAAAGAAGCTGCAGAAAAAGTCTTCTGTGCAAGGTACTGCGGGTGTTCTCCGCAAAAACAATCAAAAACAGAATTGTTCAGTTGACAAGGGCAAGTTACCATCAAAGCCATCGATTTCCAATGATAGGAAAGTTCTGTCAGGGGGTTCCCCCTATGGGCGCCATAGAAGTTCTAATAGTAGATCTACTGGGAAATCCAAAAGTGGTACCAGGAAGTCAAGCTTGGGTGCATCAGATTGTGAAAATGAAGTTTTATATACCAGTACAAATAATTTCCCTAGAAAGAAAAGGTCCACAGACAAGGACTGGAATGATCGGGTTGTGGATAATATGTTCATTGACAAAACAAAGAAGCCTATTGAGTCTAATCTAGAAGGTAAGGACAGCTTTAGTTGGGCAGGAGAAGTCAAAAGGAAAGACATGGATGTTGTTTCCTTTACGTTTACCACACCATTGGCAAGAAATAACAATGGCTTTGATGCATCTGGGCAAGTTGGTCAGAAGGTCAATGGCTGTTCCTTGGATCACCACATTAAACAAGTATTGATTGAGTCAGACAATGCAACAACTCCAGTAGGATACAATGTAATAGCTGGTGATGCCTTGAGTGTTCTTTTAGAACAGAAACTGAAGGAATTTATGTATGGAGTCGAGACTTCATGTAACAGTTCTTCTAAAGACAGGACATCTTCTAGTATTGCATCAAACTCAGTAGACCCGTCATCTTCCCCGAGTTTAGTTAACCTCCTCCCGAGATTGCAACAAAAGGACCAAGACATGCTATCTACAGATACATTATGCGCCAGGCACTATTCTGATATCTCCCTCACTAGTCTTCCTGAAGTAACATCAAAACATAAGTCATTGGTTTTTGATGGGATGAAGGAGTTTAGGTCCAATCATATCGAATCACCGCTATTCAACGGTCGACACCCAAGTCCAATCTCTGTTCTTGAACCTTCTTTCTCAATTGAAAGTTGTGAATCTCTAGTCAGCACAAATGCTACTAATAGCACAGGAGAAAGCAAGTTGTGCTCATTTGTGCAAGCTCAAGAAGTCTTTGACCCGAACACTTCAAGGAAGTCTTATCATGCAGAAGCTGATACTGAGCTGTCGGATTCAGCTTCTTCAACATCAACTGGAACCATTGTAAAGAAGCGTACAGATGCATTTTCTATCATGAAATTTGGAAGATCAAGTACATGGGAACTGGACTACGTGAAAGAAATATTGTGTAATGTGGAACTGATGTTTATGGACTTTGCCCTGGGTCAAGCACGAGAGGTTGTGAGCCCCCATCTATTCAATCAGCTGGAAAGTATGAAAGAAAGGTCTGAGAACGTTGGTGGTGAGCCTAGGATAAACAGGAAAGTTATTTTTGATTGTGTGAGTGAATGCATGGACATAAGATGCAAGCGTTATGCATGTGGGAGTTACAAAATGTGGGCCAAAGGAGTTATGATGGTGAGAAAGAAGGAACGGTTGGCAGAGGAAGTGCACAAGGAGATTTCTGGTTGGGGAGCCATGGGGGATTCAATGGTTGATGAACTTGTAGATAAGGACATGAGCAACCAATATGGAAGATGGCTAGAGTTTGATGTTGATGGTTTTGAACTAGGGGCAGAAGTTGAGGATCAAATACTTGATTCTTTGGTCAATGATTTTGTTGCTGAAATCTTGCAATATTAA 2832 0.4184 MGVEKEGTKSGGGHVGGFFQLFDWTSKSRKKLFASKSDAPESLKQGKKVDASLAMTRPYVGVNEDEIGAGASVRGSDHSYASSVTDDEACGTRVPGVVARLMGLDSLPPSGFPEPYSSPYFDARSLQDAQYCRKNLSYQHDQAIYSGNLLEKFEGSSRNFVEQRSQKILSRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKTPGFIPSNNPAYIMEAAARIIEPGPQATAKPKTPSIASSSVSLKVRGLKEKAEASQKGSLSGLSTMTSRARDLKEKREVSQRTIRLSEPSQKMVESNAVKYLKGQSLNKSWNGSLDSSNGSTDAGEDLSLQNKGKSVSLAIQAKVNVQRREGLSLNGSRGLAGQKEHHEPKTNPPSKTKAQKKLQKKSSVQGTAGVLRKNNQKQNCSVDKGKLPSKPSISNDRKVLSGGSPYGRHRSSNSRSTGKSKSGTRKSSLGASDCENEVLYTSTNNFPRKKRSTDKDWNDRVVDNMFIDKTKKPIESNLEGKDSFSWAGEVKRKDMDVVSFTFTTPLARNNNGFDASGQVGQKVNGCSLDHHIKQVLIESDNATTPVGYNVIAGDALSVLLEQKLKEFMYGVETSCNSSSKDRTSSSIASNSVDPSSSPSLVNLLPRLQQKDQDMLSTDTLCARHYSDISLTSLPEVTSKHKSLVFDGMKEFRSNHIESPLFNGRHPSPISVLEPSFSIESCESLVSTNATNSTGESKLCSFVQAQEVFDPNTSRKSYHAEADTELSDSASSTSTGTIVKKRTDAFSIMKFGRSSTWELDYVKEILCNVELMFMDFALGQAREVVSPHLFNQLESMKERSENVGGEPRINRKVIFDCVSECMDIRCKRYACGSYKMWAKGVMMVRKKERLAEEVHKEISGWGAMGDSMVDELVDKDMSNQYGRWLEFDVDGFELGAEVEDQILDSLVNDFVAEILQY 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00181 943 MobiDBLite consensus disorder prediction 363 377 - -
Pral4104g00181 943 MobiDBLite consensus disorder prediction 309 330 - -
Pral4104g00181 943 MobiDBLite consensus disorder prediction 270 284 - -
Pral4104g00181 943 MobiDBLite consensus disorder prediction 740 760 - -
Pral4104g00181 943 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 939 - -
Pral4104g00181 943 MobiDBLite consensus disorder prediction 351 460 - -
Pral4104g00181 943 MobiDBLite consensus disorder prediction 249 295 - -
Pral4104g00181 943 Pfam DUF761-associated sequence motif 82 112 IPR032795 -
Pral4104g00181 943 MobiDBLite consensus disorder prediction 433 460 - -
Pral4104g00181 943 Pfam Domain of unknown function (DUF4378) 784 935 IPR025486 -
Pral4104g00181 943 MobiDBLite consensus disorder prediction 386 412 - -
Pral4104g00181 943 MobiDBLite consensus disorder prediction 601 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00181 Pral-Chr4104 1198802 1204362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00181 16 941 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 31.045 3.23e-96 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00181 - - gmx:102669513 1151.73