Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00161 ATGGGGAGAATGGGACAAGAAGAACCAGATTTGAAAACCCAGTTAGTTCTGGACATCTGCTCCATCTCTACTCGCTCCGTGGTATGCGTTCATAGGCTTCTCTCAAACCCAGCTAAGCCAACTTCTTTCATCGATTGGTATCACATCCTTGGAGTGGAAGAAAATGCAGGGCCGAATAGCATTCGCAAGCGATACCATAAGCTGGCTTTGCAGCTTCACCCAGATAAGAATAATCATCCCAAGGCTGAAATTGCCTTCAAGCTTGTCTCTGAGGCATATACATGTTTGTCTGATGCTGCGAAGAGAAAAGCCTTTGAGCTAGAGAGATGGAAAAACTTCTGCTTTGAGTGCAAAAGGATCCCATACTCATCATCTGGCAGTGTCCCTCGCAATTCCCATGGTGGTTCAAGTTCCAAGGTATGGAATATTATCAGCAGGTCAAGATCCTACAAGTTCTGGAGAAATATAAAGGAAATTAGAGAAAGATTCAAGGAGGAGGCTAAGGTGATAGAGAACTGTTTGAGGGCAAATTCAATGCCCAGGAAAGAATCTCCACTTTTCAATCCAGTAGATTATTTAGAAAGAAGCAGGTCTCATCGCAGAACAGAGGGAGAAACCCCCGTGTTCAACCCATCAGACTACTTGTACCAAGGCTATCCTCATCTGAGAAGCCAAATTTTCAAGAATTCCGATAAGTTTTGGTACTTGCAGACGGAAAATAGTATTCTGCATGAGAGGGGAGCATCCAAGTATGACTCTCCAGTTTTTGAGGTCAGACCAGAAAGGAGAATGTTTACCAGCAAATTTGCTTATGTCCCGTCATGA 825 0.4376 MGRMGQEEPDLKTQLVLDICSISTRSVVCVHRLLSNPAKPTSFIDWYHILGVEENAGPNSIRKRYHKLALQLHPDKNNHPKAEIAFKLVSEAYTCLSDAAKRKAFELERWKNFCFECKRIPYSSSGSVPRNSHGGSSSKVWNIISRSRSYKFWRNIKEIRERFKEEAKVIENCLRANSMPRKESPLFNPVDYLERSRSHRRTEGETPVFNPSDYLYQGYPHLRSQIFKNSDKFWYLQTENSILHERGASKYDSPVFEVRPERRMFTSKFAYVPS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00161 274 Gene3D DnaJ domain 44 169 IPR036869 -
Pral4104g00161 274 CDD DnaJ 45 98 IPR001623 -
Pral4104g00161 274 PANTHER BNAC03G44070D PROTEIN 23 246 - -
Pral4104g00161 274 SUPERFAMILY Chaperone J-domain 37 108 IPR036869 -
Pral4104g00161 274 SMART dnaj_3 44 101 IPR001623 -
Pral4104g00161 274 Pfam DnaJ domain 45 105 IPR001623 -
Pral4104g00161 274 ProSiteProfiles dnaJ domain profile. 45 109 IPR001623 -
Pral4104g00161 274 PRINTS DnaJ domain signature 65 80 IPR001623 -
Pral4104g00161 274 PRINTS DnaJ domain signature 47 65 IPR001623 -
Pral4104g00161 274 PRINTS DnaJ domain signature 118 137 IPR001623 -
Pral4104g00161 274 PRINTS DnaJ domain signature 81 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00161 Pral-Chr4104 1057691 1059191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00161 45 106 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 1.01e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00161 - - gmx:100801809 372.859