Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00158 ATGGTTTTCTTTCCATCTCTTGTCAATGGATTGGCGAGAACTGTGTCATTCAGAAGAGAAAAGAATAGTCCAAAGGATGAAGGTGGAAGGAAAGTTGTGGAAGCATTGGCCAAAGAAGCAAAGAAGAATGAACTGTTGTTGAGCTCATCTGGAACTGTTAAGTCTCATAAGGCTAACACTTTTGCATCTGTCTTCTCCAAGAGGGGCACAAAAGGGACCAATCAGGATCGTCTTGCTGTTTGGGAGGGGTTTGGTTGCCAAGATGACATGATCTTCTGTGGAATATTTGATGGGCATGGCTCATGGGGACACTTTGTAGCCAAAAGGGTCAGAGAATTAATACCTCTTTCTTTACTCTGCAACTGGCAAGAAGCCTTGGCTACAACATCACTTGATCTGGATTTTAAACTTGAAGAAGACAGAAACCTTCATTGGTTTGACCTATGGAAGCAATCATATTTGAAGACTTGTGCTGCTGTGGATCAGGATCTGAAGAACCATACCCGCTTTGATTCCTTTCAAAGTGGTGCTACTGCTTTGACAATTATTAAACAGGGTAAACTTCTCACCCTAGCAAATTTAGGTGACTCTCGGGCTGTCTTGGCAACTGCTTCAGAGGATGATGATGGCACACTGATTCCCCTTCAACTTACAACTGATTTAAAGCCAAACTTACCAGAGGAAGCGGAGCGCATAAAGAAGTGTAAAGGGAAGGTGTTTTGTATGGAAGATGAACCAGGAGTGTACAGAGTGTGGTTGCCAGATGGTAAAACGCCAGGGCTTGCCATATCAAGAGCCTTTGGTGATTACTGTGTCAAGGACTTTGGACTAATCTCTGTGCCTCAAGTCACTCAAAGAACACTCACCACCAGGGATCAGTTCATAATCTTGGCATCAGATGGGGTATGGGATGTTATTTCCAACGATGAAGCAGTGAAGATTGTATCCTCAGTGCCTCAGAAGGAAAAAGCAGCTCAGAGACTGGTTCAATGCGCTGCATATGAATGGAAACGAAAGAGAAGAAACATTGCCATGGATGACATGTCGGCTATTTGTCTCTTCTTTCACTCCTCTTCTTCATCTTATTCGCTTAAACCTTCTAGGCGTGTCAAATAG 1116 0.4346 MVFFPSLVNGLARTVSFRREKNSPKDEGGRKVVEALAKEAKKNELLLSSSGTVKSHKANTFASVFSKRGTKGTNQDRLAVWEGFGCQDDMIFCGIFDGHGSWGHFVAKRVRELIPLSLLCNWQEALATTSLDLDFKLEEDRNLHWFDLWKQSYLKTCAAVDQDLKNHTRFDSFQSGATALTIIKQGKLLTLANLGDSRAVLATASEDDDGTLIPLQLTTDLKPNLPEEAERIKKCKGKVFCMEDEPGVYRVWLPDGKTPGLAISRAFGDYCVKDFGLISVPQVTQRTLTTRDQFIILASDGVWDVISNDEAVKIVSSVPQKEKAAQRLVQCAAYEWKRKRRNIAMDDMSAICLFFHSSSSSYSLKPSRRVK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00158 371 CDD PP2Cc 61 355 IPR001932 -
Pral4104g00158 371 ProSiteProfiles PPM-type phosphatase domain profile. 61 355 IPR001932 -
Pral4104g00158 371 SMART PP2C_4 52 353 IPR001932 -
Pral4104g00158 371 PANTHER PROTEIN PHOSPHATASE 47 353 IPR015655 GO:0004722|GO:0006470
Pral4104g00158 371 SUPERFAMILY PP2C-like 52 356 IPR036457 -
Pral4104g00158 371 FunFam Probable protein phosphatase 2C 34 52 357 - -
Pral4104g00158 371 Gene3D - 46 358 IPR036457 -
Pral4104g00158 371 Pfam Protein phosphatase 2C 73 332 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00158 Pral-Chr4104 1037034 1039638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00158 1 364 PP2C-type Phosphatase Gene Family AT3G05640 60.000 1.43e-163 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00158 - - gmx:100814087 545.428