Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00154 ATGAATTCGAATTTTGGCAAACCCAACCAGCAGAAAGGTTCTGCAGCCTCTCTGAACAACTTTAATTTCGACTTTGATCTTGGGATCGGATCGAATCGACCCAAATCTCTCAATGATCAGAAAAACCATACCCCGTCCAATTCATATTTTACTTCTTCCTCCACATTTTCGTCTACTCAACCAAGACCCGCTTGGCAACCAAGCAAACCATCATGGACTCACCAGCCGTCGCCCAGTCTGGCGGCTCAGTCCGGCTTGCCGGGTGGGCCTGTTTCAATGGTTGGGGATATCTTCGGCAAGAGCTGGGGATCGACTCAACCTTCGGCTTCGAATTCGAGTATCGGAACTATTAATAAAGATCCTAATCTCTTTGGGGATTTGGTGGGCTCTGCCTTAGGACAGAGTTCTAAGAGTAGCGGCAATGTTCCCCTGAAAAATGCTTCTCCTATTTCGAAGGCATCCAGTACTGCATCGAACAAGAGTTCGTTTTCCATGGGGAACATGGCGGATTCTTTGCCTAAAACCAGTAGTACAGTTCAAAGCAATGGAAGTTGGGGATCTTCTGGGAAGGCGGGGAGCTATTCCAGCGGCTACAATAGTAATAGTACTATGAGCTCCAATAAAAGCACCAATCTTGGGGGTCCTTCATTGCGCAGTGTGAGTGTTGGGGGTGGTGCGGCTGGTAGTGGAATGAGTTCTAATAAAGATCCATTTAGTTCTCTGTCTGGTTTTGGGTCCAAACAATCTGGTAGTCTTAATTCAGCGAGCAAAGCAAAAGAGAATGACACGGGGAATGATGGTTTTGGACATTTTCAGAGTGCTTCCAAACCGAGCTCTACTGCATTCCCATCAAGTAGTTCAACAGCAAATAGTATCAATCTTAATGGATCCGCATCTTTGGGCCAGAAGCCTGTGCAAACTTCTGGTAGTGATCCATTGGACATGTTCTTCTCAAGTTCCTCGGCCACATCTGGAAGTGCTCCTGTGGCCTCTGAAGAATTTGGAGGACAGCCTTCTTCAGAAGTTGATGACTGGGGCTTAGATTCTGAGTTTGGTGGGGGAGGCCATGATATGGGTGGAACAACCACTGAGCTTGAAGGACTCCCCCCTCCTCCTGCTGGTATATCTGGTTCTGCAGCAAAAGCCAAGGGGTTGGACAATTACAAGCAGGGACAATTTGCTGATGCTATAAAGTGGCTTTCCTGGGCTGTCATCCTTCTTGAGAAATCAGGTGATAATGCAGGCACTACGGAAGTTTTGTCATGCAGGGCCTCGTGTTTCAAAGAAGTTGGGGAGTACAAAAAAGCAGTAGCGGATTGTACGAAGGTGCTTGAGATTGAAGAAACAAATGTATCCGTTCTCGTACAACGTGCTCTTTTATATGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGAACTGTTCTGAAGATTGATCCTAGTAATAGGGTTGCAAGAAGCACCATTCACCGATTGAATAAGATGGCTGATTAG 1500 0.464 MNSNFGKPNQQKGSAASLNNFNFDFDLGIGSNRPKSLNDQKNHTPSNSYFTSSSTFSSTQPRPAWQPSKPSWTHQPSPSLAAQSGLPGGPVSMVGDIFGKSWGSTQPSASNSSIGTINKDPNLFGDLVGSALGQSSKSSGNVPLKNASPISKASSTASNKSSFSMGNMADSLPKTSSTVQSNGSWGSSGKAGSYSSGYNSNSTMSSNKSTNLGGPSLRSVSVGGGAAGSGMSSNKDPFSSLSGFGSKQSGSLNSASKAKENDTGNDGFGHFQSASKPSSTAFPSSSSTANSINLNGSASLGQKPVQTSGSDPLDMFFSSSSATSGSAPVASEEFGGQPSSEVDDWGLDSEFGGGGHDMGGTTTELEGLPPPPAGISGSAAKAKGLDNYKQGQFADAIKWLSWAVILLEKSGDNAGTTEVLSCRASCFKEVGEYKKAVADCTKVLEIEETNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRVARSTIHRLNKMAD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00154 499 SMART tpr_5 377 410 IPR019734 GO:0005515
Pral4104g00154 499 SMART tpr_5 451 484 IPR019734 GO:0005515
Pral4104g00154 499 SMART tpr_5 417 450 IPR019734 GO:0005515
Pral4104g00154 499 SUPERFAMILY TPR-like 379 492 IPR011990 GO:0005515
Pral4104g00154 499 PANTHER OS03G0340700 PROTEIN 1 499 - -
Pral4104g00154 499 Pfam Tetratricopeptide repeat 452 484 IPR019734 GO:0005515
Pral4104g00154 499 MobiDBLite consensus disorder prediction 135 217 - -
Pral4104g00154 499 ProSiteProfiles TPR repeat profile. 451 484 IPR019734 GO:0005515
Pral4104g00154 499 Gene3D Tetratricopeptide repeat domain 377 498 IPR011990 GO:0005515
Pral4104g00154 499 MobiDBLite consensus disorder prediction 99 117 - -
Pral4104g00154 499 MobiDBLite consensus disorder prediction 226 330 - -
Pral4104g00154 499 MobiDBLite consensus disorder prediction 135 379 - -
Pral4104g00154 499 MobiDBLite consensus disorder prediction 29 117 - -
Pral4104g00154 499 MobiDBLite consensus disorder prediction 33 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00154 Pral-Chr4104 995498 997871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00154 392 496 Calmodulin-binding Proteins AT3G25230 32.407 1.98e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00154 - - pcin:129293443 634.024