Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00148 ATGGCGCTCGATGACCATGCCAATCCCAATTCCCATCCCTTCGACGCCAAAGGCTACGCTCTCACCACCAACATCCTCCTCACCATCACCTTCTTCTTGTTGTTCCTCATCATCCTACTGATTTTCCTTCACTTCTACGCCCGCTGGTACCTCCGCCGTGCCCGCCTCCGTCACCGCCAGCGCCGCCGTTCATATCTTGTCTTCTACGTCGACGACTCCGTCCCCTCTGACGCCCCAACATCCGTCGGTCTTGACCCCTCAGTGATTCAGTCTCTTCCTGTCTTCATTTATTCCGCCCACTCCGACCCAGTGGAATGCGCTGTGTGCTTGTCCGATTTCGAAGAGAACGAATCGGGTAGGGTTTTGCCCAGATGCAGCCACACTTTTCACGTCGAATGCATCGACATGTGGTTCCAGTCTCACTCGACCTGCCCTCTCTGTAGATCTTTGGTTGAACCTGTTGGTGATCAATGTGTGCGAACAGGGTTCGAGTTCAGGATGTCGTCAGGATGGACAAGAAGATAA 525 0.539 MALDDHANPNSHPFDAKGYALTTNILLTITFFLLFLIILLIFLHFYARWYLRRARLRHRQRRRSYLVFYVDDSVPSDAPTSVGLDPSVIQSLPVFIYSAHSDPVECAVCLSDFEENESGRVLPRCSHTFHVECIDMWFQSHSTCPLCRSLVEPVGDQCVRTGFEFRMSSGWTRR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00148 174 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Pral4104g00148 174 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 11 153 - -
Pral4104g00148 174 Pfam Ring finger domain 105 148 IPR001841 -
Pral4104g00148 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 153 IPR013083 -
Pral4104g00148 174 FunFam RING-H2 finger protein ATL3 76 153 - -
Pral4104g00148 174 CDD RING-H2_EL5-like 105 148 - -
Pral4104g00148 174 SMART ring_2 106 147 IPR001841 -
Pral4104g00148 174 SUPERFAMILY RING/U-box 91 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00148 Pral-Chr4104 903692 904449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00148 16 152 Rapid Response to Elicitors AT3G16720 61.224 2.47e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00148 - - pcin:129310038 213.772