Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00110 ATGCAGAACGAGGAAGGTCAAATCACGGAGCTTTACATCCCAAGAAAATGCTCCGCAACAAACAGACTGATCACTGCTAAGGATCATGCTTCTGTTCAGATTAACATTGGGCATTTGGATGAGAACGGCATCTATAGTGGCAATTTTTCTACATTTGCCCTATGTGGTTTTATTCGTGCACAGGGAGATGCTGACAGTGCATTAGATCGATTGTGGCAGAAGAAGAGAGCCGAAGTCAAGCAACAATAG 249 0.4378 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHLDENGIYSGNFSTFALCGFIRAQGDADSALDRLWQKKRAEVKQQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00110 82 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pral4104g00110 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pral4104g00110 82 Gene3D - 1 81 IPR038579 -
Pral4104g00110 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Pral4104g00110 82 FunFam 40S ribosomal protein S21 1 81 - -
Pral4104g00110 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00110 Pral-Chr4104 687955 689581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00110 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 82.716 1.65e-51 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00110 K02971 - gmx:100817753 161.77