Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00109 ATGGCTAGTTCTGGAGGGGAACTTGAAATAAGTTTTGGCTATCAATGCAATAGTAATAGAGCTTCCTCTTCTAATTTAATCGATAGCTATAAAATCCTGCCTTCACTACGTAAAACAAGCAGCTTCTCTTGCTTATCTGGTGCAGCCTTAAGTGCCAATGCTACATTAGCCAACACTAGCATATGCGATGGTGTCATAGGAGGAGAAATTCTTCCAAGCTGGGACTCTCCTAATATGTTTCGTAAGGTAGCCTCTTCTTCAAACCTTTCAAGGTTGGACATGTTGTCATCCTCTCTCCAAAGCACTTTGTCAAATTTAAGTTGCAGTCCGTCCACCTCGAGCAATATGCTTGAACATGACTCTTGCACAGTAAAATCCACGATTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGACAGAGTTCAAGCAGTTTGTTCCGAAGAGAATGGGTGGCTTTTTTGTGCTATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCCGGTACCCTGTTTGATACCATTTCATCTTATTTTAGCAAGTTATATTCAGAATTGGAGACAGATTCTATCAGTACTTCTAACAACATGGGTTTGGATGGATCAGTCCAACATAAGTTGGATGATAGCCTTCATAATTGTGACGAAAAATCATTTTCAGATGGGGTACTTGATTGCCTACAGCGTGCTCTTAGGCAGGTTGAGAATGATTTCCTACACATGGTTGACCAAGAAATGGAGGATCGCCCAGACTTGGTTTCGATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTGTATACACTTAATCTTGGTGACAGCAGAGCAGTGTTGGCAACAAGCGATTGTGAATCAAATGGGGATGGAAAACTCAAAGCTATCCAGCTTACAGATAGTCACACTGTTGAAAATGAAGCCGAAAGAGCTCAGCTTCTGGCTGATCATCCTGATGATCCTATGACCATTGTATCAGGAAGAGTGAAAGGGAAACTGAAGGTTACCCGCGCAATTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGGATCCTTCGGGTTCGTAATCTTGTAAGCCCTCCATATATTTCTGCTGAACCATCGTTAGGTGTGCATAAGATCTCAAGTTCTGATCATTTCGTCATAGTGGGGAGTGATGGTTTATTTGATTTCTTCAACAATGACGAAGCAGTGGAGCTTGTAGAGTCTTATATCCAGAGCAACCCTTCTGGTGATCCAGCAAAGTTTCTTGTCGAGCAGCTTCTATCAAAAGCAGCTGATTGTGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCGGGAAGGAGGAGGAAGTACCATGACGATGTAACCGTAATTGTGATCATCCTTGGCACTAATCAGCGGACTTTAAAGGCATCAACTTGTATATGA 1479 0.4233 MASSGGELEISFGYQCNSNRASSSNLIDSYKILPSLRKTSSFSCLSGAALSANATLANTSICDGVIGGEILPSWDSPNMFRKVASSSNLSRLDMLSSSLQSTLSNLSCSPSTSSNMLEHDSCTVKSTIAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFSKLYSELETDSISTSNNMGLDGSVQHKLDDSLHNCDEKSFSDGVLDCLQRALRQVENDFLHMVDQEMEDRPDLVSIGSCVLLVLLHGNELYTLNLGDSRAVLATSDCESNGDGKLKAIQLTDSHTVENEAERAQLLADHPDDPMTIVSGRVKGKLKVTRAIGVGYLKKKSLNDALMGILRVRNLVSPPYISAEPSLGVHKISSSDHFVIVGSDGLFDFFNNDEAVELVESYIQSNPSGDPAKFLVEQLLSKAADCAGFSMEELMNVPAGRRRKYHDDVTVIVIILGTNQRTLKASTCI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00109 492 SMART PP2C_4 130 477 IPR001932 -
Pral4104g00109 492 SUPERFAMILY PP2C-like 149 480 IPR036457 -
Pral4104g00109 492 Pfam Protein phosphatase 2C 220 433 IPR001932 -
Pral4104g00109 492 CDD PP2Cc 149 479 IPR001932 -
Pral4104g00109 492 Gene3D - 104 487 IPR036457 -
Pral4104g00109 492 ProSiteProfiles PPM-type phosphatase domain profile. 136 479 IPR001932 -
Pral4104g00109 492 PANTHER PROTEIN PHOSPHATASE 2C 123 477 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00109 Pral-Chr4104 675800 679568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00109 6 492 PP2C-type Phosphatase Gene Family AT3G16560 63.710 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00109 - - gmx:100808304 701.049