Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00099 ATGTATAATTTCCAACGCTTCAAATCCACTCTGTGCCTGAGCGGTACTGTTAGAAAATCACCAACCTCACGATGTTTTCGTCTTTCGCAACACTACCCATTGCCGGCCTTCTCTCTCGGATTCGGCACAATTGCTTCTCCAGGTGACCACTCGTTTACTGTATCATACCTCGTTAACAATTTAGGGTTTTCCCAAGAAGCTGCTTTAAATGCTTCCAAGAGAGTTCGATTTGACACCTCACAAAAGCCAGATGCAGTTGTCAGCTTCTTTGAAAGCCAAGGTTTCTCCAAGTCTATGATGAAAGATGTCCTTAGAAAGAATCGGTGGCTTCTTAATTGCGATCCCCAAAACAGGATTCTGCCCAAGTTTGAGTTTTTCCTCTCAAAAGGTGCTTCTGCCTCCGACATTGTCCTCATGGTGCAAAGGAATGCGAGATTCCTGGAGAGAAGCTTGACTAATCACATAATCCCATCATATGAATTGCTAAAAGAGTTCCTTCAAGATGACAAAACCACCATTGACTGTATAAAACGCTACTCGGCTGTGCTCCATGGTTCTCGAGTGATGCATAGTATCAATATGTTGCTTAAGAAGGGGGTGTCAGGGGCGAACATTGCTATCATACTACGTGAAACGCCTCGTGTGCTAAACTTTACAAATGAACTTGAAAGAGCGGTGGAAGAACTTAAGAGTTTGGGATTTAATCCTTCCGCCACAACATTCGGCGCAGGATTGACGGCCAAAGTGGGTTTAAGCAAATCCAAATGGGAAGCCAAGGTTGAAGTCTATAAGAGGTGGGGATGGTCAGAAGAAGCGGTGTTGAAAGCATTTAGGACGGATCCGCGCTGTATGTTAGCAGGCAAGGATAAGATTAATGCGGTGATGAGTTTTTGGGTTAACCAGTTGGGCTGGAATTCTTTGCTCCTTCTCAAAAGACCAACATTCATTGGGTTTAGCTTGAAGAAAAGGATTATTCCTAGGGCTTCTGTTCTACAGTTTCTTTACTCAAAAGGTTTGGTGAAGAAGAATGCAAGCGTAGTCAGGCCATTTGTTCTTCCTGAAAAGCAGTTCCTGGAAAGATATGTGAAATGTTTTAAGGAGCACGATCATAAGTTAATAAAGCTATATGAAGAAAATATGAAGGATGCTGACATGTCATGCTCATGA 1167 0.4293 MYNFQRFKSTLCLSGTVRKSPTSRCFRLSQHYPLPAFSLGFGTIASPGDHSFTVSYLVNNLGFSQEAALNASKRVRFDTSQKPDAVVSFFESQGFSKSMMKDVLRKNRWLLNCDPQNRILPKFEFFLSKGASASDIVLMVQRNARFLERSLTNHIIPSYELLKEFLQDDKTTIDCIKRYSAVLHGSRVMHSINMLLKKGVSGANIAIILRETPRVLNFTNELERAVEELKSLGFNPSATTFGAGLTAKVGLSKSKWEAKVEVYKRWGWSEEAVLKAFRTDPRCMLAGKDKINAVMSFWVNQLGWNSLLLLKRPTFIGFSLKKRIIPRASVLQFLYSKGLVKKNASVVRPFVLPEKQFLERYVKCFKEHDHKLIKLYEENMKDADMSCS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00099 388 FunFam Mitochondrial transcription termination factor-like 151 368 - -
Pral4104g00099 388 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Pral4104g00099 388 SMART mt_12 173 201 IPR003690 GO:0003690|GO:0006355
Pral4104g00099 388 SMART mt_12 206 235 IPR003690 GO:0003690|GO:0006355
Pral4104g00099 388 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Pral4104g00099 388 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Pral4104g00099 388 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Pral4104g00099 388 Gene3D Transcription termination factor 3, mitochondrial 190 374 IPR038538 -
Pral4104g00099 388 Gene3D Transcription termination factor 3, mitochondrial 49 189 IPR038538 -
Pral4104g00099 388 Pfam mTERF 87 235 IPR003690 GO:0003690|GO:0006355
Pral4104g00099 388 Pfam mTERF 188 357 IPR003690 GO:0003690|GO:0006355
Pral4104g00099 388 PANTHER CGI-12 PROTEIN-RELATED 50 366 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00099 Pral-Chr4104 622008 623599 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral4104g00099 mTERF 6.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00099 K15031 - gmx:102667698 336.265