Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00089 ATGAATGAGAGATTTTTCGTGAACTGCACAACCACCACGACATCGTCTGGACAAGCCAAAACAAGTTTGATTTACGGTGGTAACAAACCAGTTCTGGACATCTCCGTTGATCCACCTGAATTGACCGTCTCGAATAATGTTTACAAGCACTGCTATAATTCAAAGCGTGGGTTTGGGTCGCACCTAATTCAGTTCGGGAAATTTTCAATATCAAACACGAAGAACAGCTTCACAGTGGTGGGCTGTGACACCCACGCTTCCTTCACGGACATGGACAGCAGCTTTACAACAGGCTGCATGTTGAGTTGCACGAGCAGGACGAGGTTCGAGGAGGGGGCGTGCTCTGGTGTGGGATGCTGCCAGACCAATTTCCCCGATGCCATCATGAGCTATAGTATCACTTTGACGAGTTCTCGCAACTACACGGACGTGCATAACTTCAACCCTTGCGGCTATGCCTTTGTTGCCAAGGAAGGATCCTTCAACTTCTCATATCGAGACCTGCTTGATCTCAGCAACAGAACACAGTTTCCCCTCGTCCTGGATTGGGCTGTTGCCAATCAGACATGCCATGAAGCCCAGAAAGATCCGAGCAGCTACGCCTGCAAGCAAAACAGTATATGCAAAAGCTCAGAAGGCGGTATGGGGTACTGCTGCGTTTGTAAAGAAGGTTTCAGAGGCAACCCCTACCTCTCTCACCCCGATCTTGGCTGCAAAGATATTAATGAGTGCGACGTAAAGAATCGCTGCAGCAGAAGATGCCATAATGTGGAAGGAAATTATACTTGTTCGTGTCCGCCGGGTTATAGAGGCGACGGCTATATCGATGGATCAGGCTGCAAATTCCCTCTCATGCAAATTTCATTGGGCATTTCTTTAGCCTTACTAGTTCTATTCACATTTGTCTTCACATTATGCTGGGGACACAAGCAAAGATCACTAAAGCGACTTAGAAGAATGTATTTTGAGCAAAATGGAGGAAATTATATGCTGCAGCAAATTTATCGACAACAAGGACATACTGATAGGACCAAGATTTTTTCCGAAGACGAGCTCAAAATTGCAACAAACAACTTCGATGAAAGCAGAATCCTTGGTCGTGGAGGGCAAGGTACGGTTTACAAGGGTATATTGTCAGATAACAGGCATGTTGCCATAAAGAAGTCCAGAATTAGTGGAAATCACAGGCAAATAAAGGATTTTATCAATGAAGTGGCTGTACTTTCTCAAATCAACCATAGGAATGTGGTTAAACTTTTCGGATGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTGTATGAGTTTGTAGACAATGGCACCCTTCTTGAACATATAGACCCACTAAAAAACAAGAACTCTCTTTCATGGGAGACCCGATTAAGGATTGCTGCAGAAACAGCCGGGGCCATCTCATATTTACATTATGCTGCTTCTATTCCAATTATTCATCGTGATATTAAATCTACCAACATACTATTAGATCATAATCATAGAGCGAAAGTTTCTGACTTTGGAGCCTCAAAACTTGTTCCTCTAGATGAAACTCAAATTACTACAGTGGTTCAAGGGACATTAGGTTATTTGGATCCGGAGTACCTCTTCACAGGTCAGCTGAATGAGAAAAGTGATGTCTATAGCTTTGGAGTTGTACTTGTGGAGCTAATCACCGGAAATAAAGCAGTTGAATTCAATAGGCCAGAAGAGAGAAATTTAGCTATGCACTTTGCATCTTTGATGAAGGAAGACAACTTGCGGAAGATTCTTGACAAGCGAGTGTTGGATGTGAAGAACGCAGAGCAACTAAAGGAAGTTGCTTTCTTGGCAAGGAGGTGCATTAGAGTTAATGGAGAGGAAAGACCGACTATGAAAGAAGTAGCGATGGAATTAGAGGGTCTAATTGCCGTGAAAAAGCATCCTTGGGTAAAGGGAGAGGATATGATGTCTGAAGTATGTGAATATTTGCTTGGTCACGTGGCTAGCAGATATGGGAATGCTCCTGCTGGCACTTCAGCTGGCTATAATGGTGGCTATGGGAATGCTAGTGCCGACACTTTAGCTGGCTATGATAGCATACAGAAACAAATGGAATTTGAGATTGCAGATGGGCGATGA 2112 0.437 MNERFFVNCTTTTTSSGQAKTSLIYGGNKPVLDISVDPPELTVSNNVYKHCYNSKRGFGSHLIQFGKFSISNTKNSFTVVGCDTHASFTDMDSSFTTGCMLSCTSRTRFEEGACSGVGCCQTNFPDAIMSYSITLTSSRNYTDVHNFNPCGYAFVAKEGSFNFSYRDLLDLSNRTQFPLVLDWAVANQTCHEAQKDPSSYACKQNSICKSSEGGMGYCCVCKEGFRGNPYLSHPDLGCKDINECDVKNRCSRRCHNVEGNYTCSCPPGYRGDGYIDGSGCKFPLMQISLGISLALLVLFTFVFTLCWGHKQRSLKRLRRMYFEQNGGNYMLQQIYRQQGHTDRTKIFSEDELKIATNNFDESRILGRGGQGTVYKGILSDNRHVAIKKSRISGNHRQIKDFINEVAVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLEHIDPLKNKNSLSWETRLRIAAETAGAISYLHYAASIPIIHRDIKSTNILLDHNHRAKVSDFGASKLVPLDETQITTVVQGTLGYLDPEYLFTGQLNEKSDVYSFGVVLVELITGNKAVEFNRPEERNLAMHFASLMKEDNLRKILDKRVLDVKNAEQLKEVAFLARRCIRVNGEERPTMKEVAMELEGLIAVKKHPWVKGEDMMSEVCEYLLGHVASRYGNAPAGTSAGYNGGYGNASADTLAGYDSIQKQMEFEIADGR 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00089 703 Pfam Calcium-binding EGF domain 240 270 IPR001881 GO:0005509
Pral4104g00089 703 Gene3D Laminin 186 274 - -
Pral4104g00089 703 ProSiteProfiles EGF-like domain profile. 240 272 IPR000742 -
Pral4104g00089 703 ProSitePatterns Calcium-binding EGF-like domain signature. 240 263 IPR018097 GO:0005509
Pral4104g00089 703 Gene3D Phosphorylase Kinase; domain 1 330 435 - -
Pral4104g00089 703 Pfam Protein kinase domain 360 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00089 703 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 61 632 IPR045274 GO:0007166
Pral4104g00089 703 SMART egf_5 189 239 IPR000742 -
Pral4104g00089 703 SMART egf_5 243 281 IPR000742 -
Pral4104g00089 703 SUPERFAMILY Protein kinase-like (PK-like) 341 629 IPR011009 -
Pral4104g00089 703 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 254 265 IPR000152 -
Pral4104g00089 703 SUPERFAMILY EGF/Laminin 240 273 - -
Pral4104g00089 703 CDD STKc_IRAK 365 632 - -
Pral4104g00089 703 Gene3D Transferase(Phosphotransferase) domain 1 436 649 - -
Pral4104g00089 703 SMART egfca_6 240 281 IPR001881 GO:0005509
Pral4104g00089 703 CDD EGF_CA 240 272 - -
Pral4104g00089 703 FunFam Wall-associated receptor kinase 2 329 435 - -
Pral4104g00089 703 SMART serkin_6 359 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00089 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Pral4104g00089 703 ProSiteProfiles Protein kinase domain profile. 359 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00089 703 FunFam Fibrillin 2 235 276 - -
Pral4104g00089 703 FunFam Wall-associated receptor kinase 2 436 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00089 Pral-Chr4104 552825 556049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00089 51 703 Receptor kinase-like Gene Family AT1G21230 45.846 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4104g00089 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00089 - - pcin:129293718 745.347