Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00087 ATGGAAATCTCATTGGGCATTTCTGTTGCCTTCCTTTTTGTCTTCACATTTGTCTCCACATTATGCTGGGGACACAAGCAAAGATCACTAAAACAACTTAGAAGGAAGTATTTTGAGCAAAATGGAGGAAATTATCTGCTGCAGCAAATTTATCAACAACAAGGACATACTGATAGAGCCAAGATTTTTTCTGAAGATGAGCTTAAAACTGCTACAAACAACTTTGATGAAAGTAGAATTCTTGGCCGTGGAGGACAAGGCACAGTTTATGAGGGTATATTACCAGATAACACGCTTGTTGCCATCAAAAAGTCCAGAATAGGTGGGGATCCTAGACAGATTAAGGATTTTATCAATGAAGTGGCTGTACTTTCCCAAATTAACCATAGGAGTGTGGTCAAACTTTTTGGGTGTTGTCTTGAAACGGAAGTTCCTTTATTAGTTTATGAGTATGTGGACAATGGCACACTTCTTGAACATATAGACCCACTAAAGAATGAGCATCCTCTTTCATGGGAGACTAGATTAAGGATTGCTGTAGAAACGGCCGAAGCCATCTCATATTTACACTCTGCTGCTTCTATTCCAATTATTCATCGCGATATTAAATCTGCCAACATACTATTAGATCACAATCATAGGGCAAAAGTTTCTGACTTTGGAGCCTCAAGACTTATTCCTCTTGATGAAACTCAAGTTACTACCGTCGTCCAAGGAACATTAGGATATTTGGATCCAGAATACCTCCTTACGGGTCAATTGAATGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTACTTGTGGAGCTAGTCACCGGAAATAAAGCAGTTGACTTCAACAAGCCAGAACAAAGAAATTTGGCTATGCACTTTGCATCTTCACTGAAAGAAGACAACTTGTGGGAGATTCTTGACAAGCGAGTGTTAGATCAGAAGAATGAAGAGCAGCTAAAAGAAGTTGCTTTCTTGGCAAGGAAATGCATCAGGGTTAATGGAGAGGAAAGGCCGACTATGAAAGAAGTAGCAATGGAACTAGAGGGTCTAATTTCTATGAAAAAACATCCTTGGGGAAAGCGAGAGGATATGATGTCTGAGGAATGTGAATACTTGTTTGGTCATGTAACTGATGGGTACGGAAATGCTAGTGCTAGCACTTCAACTGTCTATGATAGCATACAGAGAGAAATAGCATTTGAGATTGAAGATGGGCGATGA 1215 0.3959 MEISLGISVAFLFVFTFVSTLCWGHKQRSLKQLRRKYFEQNGGNYLLQQIYQQQGHTDRAKIFSEDELKTATNNFDESRILGRGGQGTVYEGILPDNTLVAIKKSRIGGDPRQIKDFINEVAVLSQINHRSVVKLFGCCLETEVPLLVYEYVDNGTLLEHIDPLKNEHPLSWETRLRIAVETAEAISYLHSAASIPIIHRDIKSANILLDHNHRAKVSDFGASRLIPLDETQVTTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELVTGNKAVDFNKPEQRNLAMHFASSLKEDNLWEILDKRVLDQKNEEQLKEVAFLARKCIRVNGEERPTMKEVAMELEGLISMKKHPWGKREDMMSEECEYLFGHVTDGYGNASASTSTVYDSIQREIAFEIEDGR 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00087 404 SUPERFAMILY Protein kinase-like (PK-like) 58 346 IPR011009 -
Pral4104g00087 404 CDD STKc_IRAK 81 348 - -
Pral4104g00087 404 Gene3D Transferase(Phosphotransferase) domain 1 152 368 - -
Pral4104g00087 404 FunFam Wall-associated receptor kinase 2 152 368 - -
Pral4104g00087 404 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 349 IPR045274 GO:0007166
Pral4104g00087 404 SMART serkin_6 75 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00087 404 Pfam Protein kinase domain 76 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00087 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pral4104g00087 404 ProSiteProfiles Protein kinase domain profile. 75 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00087 404 FunFam Wall-associated receptor kinase 2 45 151 - -
Pral4104g00087 404 Gene3D Phosphorylase Kinase; domain 1 47 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00087 Pral-Chr4104 545861 548052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00087 3 404 Receptor kinase-like Gene Family AT1G21230 53.580 1.19e-142 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4104g00087 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00087 - - pcin:129293718 570.466