Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00084 ATGGTTTTGATGAATGCCTTGCATTTGAAACTGGCATTGCTGGTCTGCACCACGGCGGCGGCGGCGGCGGCGGCGGAGGCCCAAACGAAACCTGGTTGCGACAACAAGTGTGGGAACGTGAGCATCCCCTATCCCTTTGGCACCAGCAAGAACTGCTGCATGAATGAAAAGTTTTTTGTGAACTGCACAACCACCACGACATCATCTGGACAAGCCACAACAAGTTTGATTTACGGTACTAACATTCCAGTTCTGGACATCTCCATTGATCCTCCTGAATTGACCGTCTCGGATAATGTTTCCAAGCACTGCTATAATTCAAAGTTTGGGTTTCGGTGGCACGTAATTAAGTTCAGGAACTTTTCAATATCAAACACGAAGAACAGCTTCACGGTGGTGGGCTGTGACACCTACGCTTACTTCAAGGACCTGAACAGCAGCTTTATAACAGGCTGCATGTTGAGTTGCAGGAGCAGGACGAGGTTCGAGGAGGGGGCATGCTCCGGTGTGGGATGCTGCCAGACCAATTTCCCCCAAGCCATCATGAACTACAATATTACCTTGACGAGTAGCATTGGCAAGTACAAGGCCGTGCGGGACTTCAACCCTTGCGGCTACGCCTTTGTTGCCAAGGAAGGATCCTTCAACTTCTCATATCGAGACCTGCTTGATCTCAGCAACAGAACACAATTTCCCGTCGTTGTGGATTGGGCTGTTGCCAATCAGACATGCCGTGAAGCCCAGAAAGATCCAAGCAGCTATGCCTGCAAGCAAAACAGCATATGCAAAGGCTCAGAAAGTGGTATGGGGTACTACTGCGTTTGTAAAGAAGGTTTCAGAGGCAACCCCTACCTCTCTTCTCCCGATCTTGGCTGCAAAGATATTAATGAGTGTGACGTAAAGAATCGCTGCAGCTGGAGATGCCATAATGTGGAAGGAAATTATACTTGTTCATGTCCGCCGGGTTATAGAGGTGACGGCTATATCGACGGATCAGGCTGCAAATTCCCTCTCATGCAAATTTCATTGGGCATTTCTGTTGCCTTCCTTTTTGTCTTCACATTTGTCTCCACATTATGCTGGGGACACAAGCAAAGATCACTAAAGCGACTTAGAAGAATGTATTTTGAGCACAATGGAGGAAATTATATGCTGCAGCAAATTTATCTTCAACAAGGACATACTGATAGGACCAAGATTTTTTCCGAAGACGAGCTCAAAATTGCAACAAACAACTTCGATGAAAGCAGAATCCTTGGTCATGGAGGGCAAGGTACGGTTTACAAGGGTATATTGTCAGATAACAGGCATGTGGCCATCAAAAAGTCCAGAATTAGTGGAAATCATAGGCAAATAAAGGATTTTATCAATGAAGTGGCTGTACTTTCCCAAATCAACCATAGGAATGTGGTTAAACTTTTCGGATGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTATATGAGTTTGTAGACAATGGCACCCTTCTTGAACATATAGACCCACTAAAAAACAAGAACTCTCTTTCATGGGAGACCCGATTAAGGATTGCTGCAGAAACAGCCGGGGCCATCTCATATTTACACTCTGCTGCTTCTATTCCAATTATTCATCGCGATATTAAATCTACCAACATACTATTAGATCACAATCATAGGGCAAAAGTTTCTGACTTTGGAGCCTCAAGACTTGTTCCTCTTGATGAAACCCAAATTACAACTGTGGTTCAAGGGACATTAGGGTATTTGGATCCAGAGTACCTCCTTACAGGTCAGTTGAACGAGAAAAGTGATGTCTATAGCTTTGGGGTTGTGCTTGTGGAGCTAATCACCGGAAATAAAGCAGTTGAATTCAATAGGCCAGAAGAGAGAAATTTAGCTATGCACTTTACATCTTTGATGAGGGAAGACAACTTGTGGAAGATTCTCGACAAGCGAGTGTTGGATGTGAAGAACGCAGAGCAACTAAAGGAAGTTGCTTTCTTGGCAAGGAGGTGCATCAGAGTTAATGGAGAGGAAAGACCGACTATGAAAGAAGTAGCGATGGAATTAGAGGGTCTAATTGCCGTGAAAAGGCATCCTTGGGTAAAGGGAGAGGATATGATGTCTGAAGTATGTGAATATTTGCTTGGTCACGTGGCTAGCAGCTATGGGAATGCTCCTGCTGGCACTTCAGCTGGCTATAATGGTGGCTATGGGAATGCTAGTGCCGACACTTTAGCTGGCTATGATAGCATACAGAAACAAATGGAATTTGAGATTGCAGATGGGCGATGA 2274 0.4481 MVLMNALHLKLALLVCTTAAAAAAAEAQTKPGCDNKCGNVSIPYPFGTSKNCCMNEKFFVNCTTTTTSSGQATTSLIYGTNIPVLDISIDPPELTVSDNVSKHCYNSKFGFRWHVIKFRNFSISNTKNSFTVVGCDTYAYFKDLNSSFITGCMLSCRSRTRFEEGACSGVGCCQTNFPQAIMNYNITLTSSIGKYKAVRDFNPCGYAFVAKEGSFNFSYRDLLDLSNRTQFPVVVDWAVANQTCREAQKDPSSYACKQNSICKGSESGMGYYCVCKEGFRGNPYLSSPDLGCKDINECDVKNRCSWRCHNVEGNYTCSCPPGYRGDGYIDGSGCKFPLMQISLGISVAFLFVFTFVSTLCWGHKQRSLKRLRRMYFEHNGGNYMLQQIYLQQGHTDRTKIFSEDELKIATNNFDESRILGHGGQGTVYKGILSDNRHVAIKKSRISGNHRQIKDFINEVAVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLEHIDPLKNKNSLSWETRLRIAAETAGAISYLHSAASIPIIHRDIKSTNILLDHNHRAKVSDFGASRLVPLDETQITTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLVELITGNKAVEFNRPEERNLAMHFTSLMREDNLWKILDKRVLDVKNAEQLKEVAFLARRCIRVNGEERPTMKEVAMELEGLIAVKRHPWVKGEDMMSEVCEYLLGHVASSYGNAPAGTSAGYNGGYGNASADTLAGYDSIQKQMEFEIADGR 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00084 757 Pfam Wall-associated receptor kinase galacturonan-binding 33 98 IPR025287 GO:0030247
Pral4104g00084 757 ProSitePatterns Calcium-binding EGF-like domain signature. 294 317 IPR018097 GO:0005509
Pral4104g00084 757 SMART egfca_6 294 335 IPR001881 GO:0005509
Pral4104g00084 757 Gene3D Transferase(Phosphotransferase) domain 1 490 701 - -
Pral4104g00084 757 FunFam Fibrillin 2 289 330 - -
Pral4104g00084 757 Gene3D Phosphorylase Kinase; domain 1 385 489 - -
Pral4104g00084 757 ProSiteProfiles Protein kinase domain profile. 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00084 757 Gene3D Laminin 297 336 - -
Pral4104g00084 757 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 686 IPR045274 GO:0007166
Pral4104g00084 757 CDD STKc_IRAK 419 686 - -
Pral4104g00084 757 FunFam Wall-associated receptor kinase 2 383 489 - -
Pral4104g00084 757 Gene3D Laminin 250 296 - -
Pral4104g00084 757 CDD EGF_CA 294 326 - -
Pral4104g00084 757 ProSiteProfiles EGF-like domain profile. 294 326 IPR000742 -
Pral4104g00084 757 Pfam Protein kinase domain 414 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00084 757 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Pral4104g00084 757 SMART serkin_6 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00084 757 SMART egf_5 297 335 IPR000742 -
Pral4104g00084 757 SMART egf_5 243 293 IPR000742 -
Pral4104g00084 757 FunFam Wall-associated receptor kinase 2 490 706 - -
Pral4104g00084 757 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
Pral4104g00084 757 SUPERFAMILY EGF/Laminin 294 327 - -
Pral4104g00084 757 SUPERFAMILY Protein kinase-like (PK-like) 396 696 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00084 Pral-Chr4104 533711 537442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00084 20 757 Receptor kinase-like Gene Family AT1G21230 43.421 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4104g00084 Pkinase 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00084 - - pcin:129293718 788.875