Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00052 ATGAGTTATAGTTCTGTCATGGAATCAAATCGCCAGCGAACAAGACGGCGGAGGACGAAGCAGGAGGAGATGGTGAGGGAAGCAATTTGGTCTTCGATTCGGGGGCATTCTTGTCCGATATGTTTCAGAAACCTCGAAGATCATTATAGGGAAGTTGCGATTCTCTCCGTGTGCATGCACGCCTACTGCATCGAATGTATTCGCAAATGGAGTGGCTTGAAAAGAAAGTGTCCTCTCTGTAATGCAAACTTCAGCTCCTGGTTCTGTAAACTCAGTCTTTCCTCTGGAGAGTTCCACAAAGAGGTGTTGCCCTTTGAGGGTTTGACCAGGAATTCTCATCGAGAAAGTGTCTCAGCCCGTACAGCTGCTCCTAGACTTATTCGTAGAACAAGAGTTGCTTTAGATGAAAGGCGAACTAGGGCACTACCATGGCGGCGATCATTTGGACGTCCTGGACATGCGAGTCCAGAAGTTGCTGCTCAGAGGAAACTTGATTGGCGTGCTAGCATATACAAGAAGCATCTGAAGGCTGTTCCTTTAAGCTCTAGCTATCTTGAGCAGATTAAATCAAGAAATAGTTTTTCAAGAGAAAAAACATTACAAAAGATTGAGCCATGGATACGGAGGGAGCTACAAGCTGTGCTTGGCGACCCAGATCCAACTGTTATAGTTCATGTGGCAACCTCACAGTACCTTGCATGGCTGGAAGAGAGAGTTAGTTCTGGACAGCTTGATGTTGAAGAGAGGTTTATATCACCACTGCGTCCTTTCCTGCAAGATAAAGCCAGGATCTTTTGGCATGAATTAAGGTGTTATGCTGAGGGTTGCTACAATATTGAAACATATGATGCTGTGGTTGGATATAGAGACCTGGAGTGA 879 0.4551 MSYSSVMESNRQRTRRRRTKQEEMVREAIWSSIRGHSCPICFRNLEDHYREVAILSVCMHAYCIECIRKWSGLKRKCPLCNANFSSWFCKLSLSSGEFHKEVLPFEGLTRNSHRESVSARTAAPRLIRRTRVALDERRTRALPWRRSFGRPGHASPEVAAQRKLDWRASIYKKHLKAVPLSSSYLEQIKSRNSFSREKTLQKIEPWIRRELQAVLGDPDPTVIVHVATSQYLAWLEERVSSGQLDVEERFISPLRPFLQDKARIFWHELRCYAEGCYNIETYDAVVGYRDLE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00052 292 SUPERFAMILY RING/U-box 37 87 - -
Pral4104g00052 292 SMART ring_2 38 80 IPR001841 -
Pral4104g00052 292 MobiDBLite consensus disorder prediction 1 20 - -
Pral4104g00052 292 ProSiteProfiles Zinc finger RING-type profile. 38 81 IPR001841 -
Pral4104g00052 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 86 IPR013083 -
Pral4104g00052 292 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 16 290 - -
Pral4104g00052 292 Pfam Ring finger domain 37 81 IPR001841 -
Pral4104g00052 292 ProSitePatterns Zinc finger RING-type signature. 58 67 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00052 Pral-Chr4104 384182 386817 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00052 28 269 C3H Transcription Factor Family AT2G39100 50.201 6.89e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00052 - - pcin:129308821 426.017