Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00050 ATGGGTGGGTGTTTTCCTTGTTTTGACAAGGAGGACAGCGGGGTGAAGAAGGAAGTGGTCAAGAAGGATTCTCTTAGGGAAGGTTCAGCTGCTCAGTCTCATCACGTCAATAGGGTTAGCTCAGATAAGTCGAAATCAAAAAGTGGCTCTGATTCTAAGAAGGAACTGCCAGTTCAAAAGGATGGAACAACTGCCCACATTGCTGCACAAACTTTTACATTTCGAGAGCTTGCAGCTGCCACGAGGAATTTCAGGCCTGAATCTTTATTAGGTGAAGGTGGTTTTGGACGCGTTTATAAAGGCCGGCTTGAAAGCTCAGGGCAAGTTGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGAGAGTTTTTGGTGGAGGTGCTCATGCTTAGCCTCTTGCATCACCCAAATCTTGTGAGCTTAATTGGTTATTGTGCTGATGGGGATCAGCGGCTGCTTGTTTATGAATTTATGCCTTTGGGGTCTTTGGAGGATCACCTACATGATCTTCCGCCTGACAAGGAGCCTCTGGACTGGAATACAAGGATGAAAATAGCAGCGGGAGCAGCAAAGGGGTTGGAATATTTGCATGACAAAGCAAACCCTCCTGTAATATATAGAGACCTAAAATCATCCAATATCCTGCTAGATGAGGGTTTTCATCCTAAGTTATCAGATTTTGGGCTGGCAAAACTTGGTCCAGTCGGTGATAAGACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCTCCGGAATATGCTATGACTGGACAGCTAACTTTGAAGTCTGATGTCTACAGTTTTGGAGTTGTTTTCCTGGAACTTATTACTGGGCGCAAGGCTATTGATAATACGCGCGCACATGGTGAGCATAATCTTGTGGCATGGGCACGACCTCTGTTTAAAGACCGTAGGAAGTTCCCTGCAATGGCTGACCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGACTCTATCAAGCACTTGCAGTTGCAGCTATGTGTTTGCAAGAACAAGCTGCCACAAGACCTCTTATTGGAGATGTTGTGACCGCTCTTACATACTTGGCCTCGCAGACATATGATCCAAATGGATCCAGTCATACTAGCCGAGTTGGTCCATCAACCCCTAGGAGCAAGGAGGATCGAAAGAACATGGCAGATAGCTCAGATAGCCCTGATCATGGACGACATCATGGATCACCTTCCACCCATAGAAACTCACCTGATTACAGGAAGAGAGACGGTAGGGATGCAAGTGCTGGGACAAGCTTGGGAAGGATTGAAACTGGTGGAGGTTCAGGAAGAAGATGGGGATTGGATGATGGAGAAAGACAGGACTCTCAGAGAGACAGCCCTCTAAGTGCTGGAAGAACTAGGGAAACTCCAAGGAACCGTGACCTGGACAGAGAACGTGCAGTCGCAGAAGCAAAAGTATGGGGCGAAAATTGGAGAGAGAAAAAGCGGGCAAATGCAATGGGAAGCTTTGATGCTACAAATGAGTGA 1521 0.4675 MGGCFPCFDKEDSGVKKEVVKKDSLREGSAAQSHHVNRVSSDKSKSKSGSDSKKELPVQKDGTTAHIAAQTFTFRELAAATRNFRPESLLGEGGFGRVYKGRLESSGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPAMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNGSSHTSRVGPSTPRSKEDRKNMADSSDSPDHGRHHGSPSTHRNSPDYRKRDGRDASAGTSLGRIETGGGSGRRWGLDDGERQDSQRDSPLSAGRTRETPRNRDLDRERAVAEAKVWGENWREKKRANAMGSFDATNE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00050 506 SMART serkin_6 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00050 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pral4104g00050 506 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Pral4104g00050 506 PANTHER OS07G0668900 PROTEIN 4 370 - -
Pral4104g00050 506 CDD STKc_IRAK 90 359 - -
Pral4104g00050 506 FunFam Serine/threonine-protein kinase PBS1 57 160 - -
Pral4104g00050 506 MobiDBLite consensus disorder prediction 19 60 - -
Pral4104g00050 506 Gene3D Transferase(Phosphotransferase) domain 1 161 375 - -
Pral4104g00050 506 Pfam Protein kinase domain 87 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00050 506 Gene3D Phosphorylase Kinase; domain 1 54 160 - -
Pral4104g00050 506 SUPERFAMILY Protein kinase-like (PK-like) 66 358 IPR011009 -
Pral4104g00050 506 FunFam Serine/threonine-protein kinase PBS1 161 376 - -
Pral4104g00050 506 MobiDBLite consensus disorder prediction 364 477 - -
Pral4104g00050 506 MobiDBLite consensus disorder prediction 38 60 - -
Pral4104g00050 506 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4104g00050 506 MobiDBLite consensus disorder prediction 380 425 - -
Pral4104g00050 506 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00050 Pral-Chr4104 353387 359482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00050 4 371 Glycoside Hydrolase AT3G07070 64.324 6.59e-169 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral4104g00050 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00050 - - qsa:O6P43_021706 897.116