Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00033 ATGAGTTCTCTTGGTGTCTCAGTGGCAGCTCAGTGTTGTGCATTATTATTGGTGGTGCTGGCAGGAACAACAATATCAGTTTCGTACGGCCAGTTAGATGCTTCGTTTTACAAAGACGCATGCCCTACGGTGCACGAGATAGTACGGGAGGTTGTTCACAATGCTTCCAGAACTGATCCTCGTATTACTGCCAGTCTCATCAGGCTTCACTTCCACGATTGCTTCGTCCAAGGTTGCGATGCACCAATATTATTGAACAAGACTGATACAATAGACAGCGAGCAAGAAGCTTTTCCAAATGCGAATTCAATCAGAGGATTGGATGTTGTGAACAACAGCAAGTCTGCGGTGGAAGCAGCTTGCCCCGCCACCGTGTCTTGTGCTGATATTCTCGCCCTTGCTGCAGAAATCTCTGTTGTCTTGGCTAAAGGAAAAGGCTGGAAAGTACAGCTGGGAAGAAGGGACAGCACCAACGCCAATCGGACACTCGCAAATCTGAAAATTCCAGGTCCCTCCCTCTCTTTGGATCAGCTTAAATCCGGCTATGCTGCTCAGGGCCTCGATCCTACTGATCTTGTTGCTCTCTCTGGTGCTCACACATTCGGAAGAGCACATTGCATCACATTTAAGGATAGGTTATATAATTTCAGTGGCAAAGGCCAACCTGATCCAAGTCTCAACTCAACTTACCTTCAGAAACTGCGACTCGTGTGTCCTCTCAATGGAGATGGCACCAACATAACCAATCTTGACCTCACCACTCCAAACACGTTCGACAATAAATATTACATCAACCTTCAACTTCACAATGGCCTCCTTAACAGTGATCAAGAGTTGTTCTCCACTTCTGGTGCAGATACCATCGCCATTGTCGATAGTTTCGCCGCCAGCCAGTCCCTTTTCTTCACTCAGTTCGCAGCTTCCATGATCAAAATGGGTAATATCAGCCCCTTGACTGGCTCTCAAGGTGAAATTCGATCTCACTGTAAGTTTGTCAACTCAGATTCCTCTCGATTCATTACTGCCGTCACTTCCACTAAAGAGTCTGATGAACATGTTCTCGTCAAGTTAAGAAAAATGTCATCCTTTCGGATTTCATTGTTGAGCCTTTGTTTGGTTGCTACCATTTTTGGAGCTTCAAATGCTCAGTTGAGTTCCTCATTCTATGCTACCACTTGCCCTAATGCTTCATCCATTGTACGTGGCGTCATTGAGCAGGCTGCTCAAAGTGACGTCAGAATCGGAGCCAAACTCATCCGCCTTCACTTTCATGATTGCTTTGTTGACGGCTGTGACGGATCGATATTGTTGGACGATGCCAATGGAATCTTATCAGAAAAGGACGCGATTCCCAACAGAAATTCAGCAGATGGATATCCTGTGGTTGACGATATTAAAACAGCTTTGGAGAATGTCTGTCCCGGAGTCGTCTCTTGTGCTGATATTCTAGCCATTGCTGCAGAAGCATCGGTTTCCTTGGGTGGAGGTCCAACATGGACAGTTGAATTGGGAAGAAGAGACAGTACAACAGCAAATCAGGCCGCAGCTCAGCTTCTTCCAGGCCCTAGAGATGGCCTCGCCAATATCACTTCCAAGTTTTCTGCTGTGGGACTCGATACCACTGACGTTGTTGCTCTATCGGGTGCACATACGTTTGGGAGGGCAAGGTGTGTGCTATTCCGTGATCGTTTATTTAACTTTGAGAATAGTAACAGTTCAGATCCGTCTCTGGACTCTACTTATCTGGAAACACTTCGTCAGGCATGTCCTCAAAACGATGGTACCTTAAACAACCTAGATCCCACGACTCCCGATACCTTTGACAACAACTATTTCACGAACCTTCAAGGTGGCCGAGGCCTTCTCCAATCCGATCAAGAATTGTTCTCCACCGCCGGATCCGACACCGTTGCCGTCGTCAATAGGTTTGCGGCTAGTCAAAGCGAGTTCTTCACTAGCTTTGCTCAGTCCATGATCAATATGGGCAAGATTAGTCCCTTGACAGGAAGCAATGGGCAGATCAGGACTAATTGCAGGAGGGTTAATTAA 2049 0.4666 MSSLGVSVAAQCCALLLVVLAGTTISVSYGQLDASFYKDACPTVHEIVREVVHNASRTDPRITASLIRLHFHDCFVQGCDAPILLNKTDTIDSEQEAFPNANSIRGLDVVNNSKSAVEAACPATVSCADILALAAEISVVLAKGKGWKVQLGRRDSTNANRTLANLKIPGPSLSLDQLKSGYAAQGLDPTDLVALSGAHTFGRAHCITFKDRLYNFSGKGQPDPSLNSTYLQKLRLVCPLNGDGTNITNLDLTTPNTFDNKYYINLQLHNGLLNSDQELFSTSGADTIAIVDSFAASQSLFFTQFAASMIKMGNISPLTGSQGEIRSHCKFVNSDSSRFITAVTSTKESDEHVLVKLRKMSSFRISLLSLCLVATIFGASNAQLSSSFYATTCPNASSIVRGVIEQAAQSDVRIGAKLIRLHFHDCFVDGCDGSILLDDANGILSEKDAIPNRNSADGYPVVDDIKTALENVCPGVVSCADILAIAAEASVSLGGGPTWTVELGRRDSTTANQAAAQLLPGPRDGLANITSKFSAVGLDTTDVVALSGAHTFGRARCVLFRDRLFNFENSNSSDPSLDSTYLETLRQACPQNDGTLNNLDPTTPDTFDNNYFTNLQGGRGLLQSDQELFSTAGSDTVAVVNRFAASQSEFFTSFAQSMINMGKISPLTGSNGQIRTNCRRVN 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00033 682 ProSitePatterns Peroxidases proximal heme-ligand signature. 542 552 IPR019793 -
Pral4104g00033 682 ProSiteProfiles Plant heme peroxidase family profile. 383 682 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 CDD secretory_peroxidase 31 332 IPR033905 GO:0004601|GO:0042744
Pral4104g00033 682 ProSitePatterns Peroxidases active site signature. 415 426 IPR019794 GO:0004601
Pral4104g00033 682 SUPERFAMILY Heme-dependent peroxidases 31 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 Gene3D Peroxidase, domain 2 169 312 - -
Pral4104g00033 682 Gene3D Peroxidase, domain 2 520 661 - -
Pral4104g00033 682 CDD secretory_peroxidase 383 681 IPR033905 GO:0004601|GO:0042744
Pral4104g00033 682 Gene3D - 388 682 - -
Pral4104g00033 682 FunFam Peroxidase 520 661 - -
Pral4104g00033 682 Gene3D - 36 333 - -
Pral4104g00033 682 PRINTS Haem peroxidase superfamily signature 542 557 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Haem peroxidase superfamily signature 600 615 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Haem peroxidase superfamily signature 477 494 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Haem peroxidase superfamily signature 415 429 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Haem peroxidase superfamily signature 495 507 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Pral4104g00033 682 FunFam Peroxidase 387 527 - -
Pral4104g00033 682 PRINTS Plant peroxidase signature 598 613 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Plant peroxidase signature 417 437 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Plant peroxidase signature 495 510 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Plant peroxidase signature 541 553 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Plant peroxidase signature 614 631 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Plant peroxidase signature 476 486 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Plant peroxidase signature 656 669 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Plant peroxidase signature 393 412 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 PRINTS Plant peroxidase signature 457 470 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Pral4104g00033 682 PANTHER PEROXIDASE 72-RELATED 381 681 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 ProSiteProfiles Plant heme peroxidase family profile. 31 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 FunFam Peroxidase 35 178 - -
Pral4104g00033 682 Pfam Peroxidase 401 646 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 Pfam Peroxidase 48 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4104g00033 682 FunFam Peroxidase 169 312 - -
Pral4104g00033 682 SUPERFAMILY Heme-dependent peroxidases 383 682 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00033 Pral-Chr4104 254357 260375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00033 363 682 Peroxidase AT5G06720 67.183 1.04e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00033 - K00430 peu:105126277 738.413