LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4104g00033	ATGAGTTCTCTTGGTGTCTCAGTGGCAGCTCAGTGTTGTGCATTATTATTGGTGGTGCTGGCAGGAACAACAATATCAGTTTCGTACGGCCAGTTAGATGCTTCGTTTTACAAAGACGCATGCCCTACGGTGCACGAGATAGTACGGGAGGTTGTTCACAATGCTTCCAGAACTGATCCTCGTATTACTGCCAGTCTCATCAGGCTTCACTTCCACGATTGCTTCGTCCAAGGTTGCGATGCACCAATATTATTGAACAAGACTGATACAATAGACAGCGAGCAAGAAGCTTTTCCAAATGCGAATTCAATCAGAGGATTGGATGTTGTGAACAACAGCAAGTCTGCGGTGGAAGCAGCTTGCCCCGCCACCGTGTCTTGTGCTGATATTCTCGCCCTTGCTGCAGAAATCTCTGTTGTCTTGGCTAAAGGAAAAGGCTGGAAAGTACAGCTGGGAAGAAGGGACAGCACCAACGCCAATCGGACACTCGCAAATCTGAAAATTCCAGGTCCCTCCCTCTCTTTGGATCAGCTTAAATCCGGCTATGCTGCTCAGGGCCTCGATCCTACTGATCTTGTTGCTCTCTCTGGTGCTCACACATTCGGAAGAGCACATTGCATCACATTTAAGGATAGGTTATATAATTTCAGTGGCAAAGGCCAACCTGATCCAAGTCTCAACTCAACTTACCTTCAGAAACTGCGACTCGTGTGTCCTCTCAATGGAGATGGCACCAACATAACCAATCTTGACCTCACCACTCCAAACACGTTCGACAATAAATATTACATCAACCTTCAACTTCACAATGGCCTCCTTAACAGTGATCAAGAGTTGTTCTCCACTTCTGGTGCAGATACCATCGCCATTGTCGATAGTTTCGCCGCCAGCCAGTCCCTTTTCTTCACTCAGTTCGCAGCTTCCATGATCAAAATGGGTAATATCAGCCCCTTGACTGGCTCTCAAGGTGAAATTCGATCTCACTGTAAGTTTGTCAACTCAGATTCCTCTCGATTCATTACTGCCGTCACTTCCACTAAAGAGTCTGATGAACATGTTCTCGTCAAGTTAAGAAAAATGTCATCCTTTCGGATTTCATTGTTGAGCCTTTGTTTGGTTGCTACCATTTTTGGAGCTTCAAATGCTCAGTTGAGTTCCTCATTCTATGCTACCACTTGCCCTAATGCTTCATCCATTGTACGTGGCGTCATTGAGCAGGCTGCTCAAAGTGACGTCAGAATCGGAGCCAAACTCATCCGCCTTCACTTTCATGATTGCTTTGTTGACGGCTGTGACGGATCGATATTGTTGGACGATGCCAATGGAATCTTATCAGAAAAGGACGCGATTCCCAACAGAAATTCAGCAGATGGATATCCTGTGGTTGACGATATTAAAACAGCTTTGGAGAATGTCTGTCCCGGAGTCGTCTCTTGTGCTGATATTCTAGCCATTGCTGCAGAAGCATCGGTTTCCTTGGGTGGAGGTCCAACATGGACAGTTGAATTGGGAAGAAGAGACAGTACAACAGCAAATCAGGCCGCAGCTCAGCTTCTTCCAGGCCCTAGAGATGGCCTCGCCAATATCACTTCCAAGTTTTCTGCTGTGGGACTCGATACCACTGACGTTGTTGCTCTATCGGGTGCACATACGTTTGGGAGGGCAAGGTGTGTGCTATTCCGTGATCGTTTATTTAACTTTGAGAATAGTAACAGTTCAGATCCGTCTCTGGACTCTACTTATCTGGAAACACTTCGTCAGGCATGTCCTCAAAACGATGGTACCTTAAACAACCTAGATCCCACGACTCCCGATACCTTTGACAACAACTATTTCACGAACCTTCAAGGTGGCCGAGGCCTTCTCCAATCCGATCAAGAATTGTTCTCCACCGCCGGATCCGACACCGTTGCCGTCGTCAATAGGTTTGCGGCTAGTCAAAGCGAGTTCTTCACTAGCTTTGCTCAGTCCATGATCAATATGGGCAAGATTAGTCCCTTGACAGGAAGCAATGGGCAGATCAGGACTAATTGCAGGAGGGTTAATTAA	2049	0.4666	MSSLGVSVAAQCCALLLVVLAGTTISVSYGQLDASFYKDACPTVHEIVREVVHNASRTDPRITASLIRLHFHDCFVQGCDAPILLNKTDTIDSEQEAFPNANSIRGLDVVNNSKSAVEAACPATVSCADILALAAEISVVLAKGKGWKVQLGRRDSTNANRTLANLKIPGPSLSLDQLKSGYAAQGLDPTDLVALSGAHTFGRAHCITFKDRLYNFSGKGQPDPSLNSTYLQKLRLVCPLNGDGTNITNLDLTTPNTFDNKYYINLQLHNGLLNSDQELFSTSGADTIAIVDSFAASQSLFFTQFAASMIKMGNISPLTGSQGEIRSHCKFVNSDSSRFITAVTSTKESDEHVLVKLRKMSSFRISLLSLCLVATIFGASNAQLSSSFYATTCPNASSIVRGVIEQAAQSDVRIGAKLIRLHFHDCFVDGCDGSILLDDANGILSEKDAIPNRNSADGYPVVDDIKTALENVCPGVVSCADILAIAAEASVSLGGGPTWTVELGRRDSTTANQAAAQLLPGPRDGLANITSKFSAVGLDTTDVVALSGAHTFGRARCVLFRDRLFNFENSNSSDPSLDSTYLETLRQACPQNDGTLNNLDPTTPDTFDNNYFTNLQGGRGLLQSDQELFSTAGSDTVAVVNRFAASQSEFFTSFAQSMINMGKISPLTGSNGQIRTNCRRVN	682

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4104g00033	682	ProSitePatterns	Peroxidases proximal heme-ligand signature.	542	552	IPR019793	-
	Pral4104g00033	682	ProSiteProfiles	Plant heme peroxidase family profile.	383	682	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Pral4104g00033	682	CDD	secretory_peroxidase	31	332	IPR033905	GO:0004601\|GO:0042744
	Pral4104g00033	682	ProSitePatterns	Peroxidases active site signature.	415	426	IPR019794	GO:0004601
	Pral4104g00033	682	SUPERFAMILY	Heme-dependent peroxidases	31	333	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Pral4104g00033	682	Gene3D	Peroxidase, domain 2	169	312	-	-
	Pral4104g00033	682	Gene3D	Peroxidase, domain 2	520	661	-	-
	Pral4104g00033	682	CDD	secretory_peroxidase	383	681	IPR033905	GO:0004601\|GO:0042744
	Pral4104g00033	682	Gene3D	-	388	682	-	-
	Pral4104g00033	682	FunFam	Peroxidase	520	661	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4104g00033	Pral-Chr4104	254357	260375	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4104g00033	363	682	Peroxidase	AT5G06720	67.183	1.04e-150	438

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4104g00033	-		K00430	peu:105126277	738.413

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