Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4104g00021 ATGGGGAAGACCAGGAAATGGCTTAGAAACTTGTTGATGTCCCGGAAGAAACACAAGGACAAAGCCAAGAGAGAATGTGAAGCTTCTCAGATTGCTTCCAGTGATGCCTCTCAAATTCCAACCCCAAAAGAGAAACGAAGATGGAGTTTCCGTAGGCCATCAGATTCCAAGCAACTCAATTCTGCAGAAACCAATGTGACTGCCTCACCGACACCACCACCACCACCAGAAGCCACCTCGGATACTGATCAGAATTTGCAGAACAACCACTTCGCTATTGTCACCACTCACAATATCACAGTTCCAAGCACTGAAGATGATGCTGCTATCAGAATTCAATCTGTTTTCCGGTCTTACTTGGCAAGAAAAGCATTGAGTGCTCTAAGAGGAATAGTGAAGTTGCAGGCATTAGTGAGGGGACATTTGGTTAGAAAACAGGCTTCGGCTGCTCTAAGATGCATGGAAGCTTTGTTGACAGCACAAGCCAGAGCGTGGGCTCAGAGGAACAGAATGACGTCAGAAGCAAAATCTAATCAGAGACACTTAAATCACCCCAGAAAAACACAGGAGAGCTTGATAAGACCTGTGTATGACTATGATGAAACTGACATGGAATCGCAAGAGAACATAAGAATTGTGAAGGTGGATGTTTCTGGATCAAAAGACAACGGCAGAAGCAGAAACAACACCATAAATTACACTCATTACAATAGTTCTGAGCACAGTTTTTCAACATATTATCACCCACATGGTTCATACTCAAAAGAAGAAAACCTCAAGGTATCTCCAGTCCCATCAGCACAGAGCAGCCCTGCATCATCAAAACCTGATGATAAGAAGCTTCCTTTTACTTCCCCAGGGACCTCTCACAATCCATCAGTCCCAAATTACATGGCCTACACGGAATCATCGAGGGCCAAATTCCGATCACACAGTGCACCCAAGCAAAGACCAGACACACTTGAGAGGCAATTAAGCCGTCCTAGAGCTTCAGTGGAAGCAAGAAACACTGGCCACAGACCAGTAATGAAGATGAGAAGGTCATCTTCACATGTAAATTCTAGTGCTCAACACTACCAATTCCCAAGCACAATCAAGCTTGACAGGTCCGCTATTTCACTGATAGAAAGTTTTTATCTTTTCTTGTGTGAAGGCAGCCTCATGAAGATAGGTGCTACTGACAGTGCACTTTCTAGGCTTCTACAGCGAGAACAGAGTGTTCCTGAGTTTTGGCGCTACAGTTGA 1245 0.445 MGKTRKWLRNLLMSRKKHKDKAKRECEASQIASSDASQIPTPKEKRRWSFRRPSDSKQLNSAETNVTASPTPPPPPEATSDTDQNLQNNHFAIVTTHNITVPSTEDDAAIRIQSVFRSYLARKALSALRGIVKLQALVRGHLVRKQASAALRCMEALLTAQARAWAQRNRMTSEAKSNQRHLNHPRKTQESLIRPVYDYDETDMESQENIRIVKVDVSGSKDNGRSRNNTINYTHYNSSEHSFSTYYHPHGSYSKEENLKVSPVPSAQSSPASSKPDDKKLPFTSPGTSHNPSVPNYMAYTESSRAKFRSHSAPKQRPDTLERQLSRPRASVEARNTGHRPVMKMRRSSSHVNSSAQHYQFPSTIKLDRSAISLIESFYLFLCEGSLMKIGATDSALSRLLQREQSVPEFWRYS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4104g00021 414 SMART iq_5 127 148 IPR000048 GO:0005515
Pral4104g00021 414 SMART iq_5 104 126 IPR000048 GO:0005515
Pral4104g00021 414 MobiDBLite consensus disorder prediction 1 84 - -
Pral4104g00021 414 MobiDBLite consensus disorder prediction 174 195 - -
Pral4104g00021 414 MobiDBLite consensus disorder prediction 247 338 - -
Pral4104g00021 414 Pfam IQ calmodulin-binding motif 107 124 IPR000048 GO:0005515
Pral4104g00021 414 Pfam IQ calmodulin-binding motif 129 146 IPR000048 GO:0005515
Pral4104g00021 414 MobiDBLite consensus disorder prediction 284 307 - -
Pral4104g00021 414 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Pral4104g00021 414 PANTHER IQ-DOMAIN 5-RELATED 1 337 - -
Pral4104g00021 414 MobiDBLite consensus disorder prediction 1 19 - -
Pral4104g00021 414 MobiDBLite consensus disorder prediction 308 329 - -
Pral4104g00021 414 Pfam Protein of unknown function (DUF4005) 276 357 IPR025064 -
Pral4104g00021 414 MobiDBLite consensus disorder prediction 170 195 - -
Pral4104g00021 414 Gene3D - 105 157 - -
Pral4104g00021 414 MobiDBLite consensus disorder prediction 259 275 - -
Pral4104g00021 414 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4104g00021 Pral-Chr4104 181984 183759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4104g00021 1 377 IQD Protein Family AT4G14750 38.821 1.80e-58 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4104g00021 - - pcin:129307883 497.278