Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4102g00027 ATGAACGGAGGAAGGAACAGGTTCCCTTTTACTCCATCACAGTGGCAAGAGCTTGAGCATCAAGCTCTTGTTTTCAAGTACATGGCTTCAGGTATTCCTATTCCTCCTGATCTCGTCTTCTCCATCAAAAGGGCCTCTCTCGACTCTCCTCTTTCTTCCAGGCTCTTGTCTCTCCCACCTCATCAGCACTTTGGGTGGAACTACTTGGAGATGGGCCCGGGAAGGAAGATAGACACAGAACCAGGGAGGTGCAGAAGAACGGATGGGAAGAAGTGGAGGTGCTCCAAAGAAGCTTACCCAAATTCAAAGTACTGCGAGAGACACATGCACAGAGGAAATAACCGTTTGAGAAAACCCCTGCAGCAGCAACAACAAGGTTTTAAAACAACGTTAAACCCGCCTACCAACAACACAAATTCCTCGACAATCACAAAAAGCAACAACACTCCTTCACTATCCCTCACAACTCATTCTTCATCCCTCTCACCTCTATCTGACCCCACCCACAATCATCATTCCTTCCTCTATAATCACCAGCCTTCAAGATCTTCTTCATCTGGTTTCAGCTTCTCTTTACAAGATGATAGTGCTTCTCACTTGAATAGTGGTTATGTTTATGATGGGCTGAAGGAAGAGGTGGACGAGCATGCTTTCTTCACAGAGCCTTCTGGGACGATGAGAAGCTTCTCTGCTTCATCAATGGAAGATTCTTCGTGGCATCTCACCCCACTCTCAATGAACTCATCGTCTTCCTCGAAACAGAGGAGCTACTCTGGTTTGTCCACCGAGTACTCTTCTTCCTTGCAGCTTCAAAATCAGAACCTTAGCGGAAGTACGAACCAGCAAGATCAAGATTGCTACATGCTGGGACTGGGGAAATCAGAAGAACCTCAGAATCAGAAGACTGTTCATCGCTTCTTGGATGAATGGCCCAACAAAAGCAAAAACTCGTGGCTTGATCTGGACGACAAATCATCCACAACCCAGCTTTCAATTTCCATTCCCACCACCACCTCTGACCATGGCCGTTTTCCAAGCTTCAATTTCAGAACCCACCAAGATGCTTGA 1068 0.4663 MNGGRNRFPFTPSQWQELEHQALVFKYMASGIPIPPDLVFSIKRASLDSPLSSRLLSLPPHQHFGWNYLEMGPGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQQQQGFKTTLNPPTNNTNSSTITKSNNTPSLSLTTHSSSLSPLSDPTHNHHSFLYNHQPSRSSSSGFSFSLQDDSASHLNSGYVYDGLKEEVDEHAFFTEPSGTMRSFSASSMEDSSWHLTPLSMNSSSSSKQRSYSGLSTEYSSSLQLQNQNLSGSTNQQDQDCYMLGLGKSEEPQNQKTVHRFLDEWPNKSKNSWLDLDDKSSTTQLSISIPTTTSDHGRFPSFNFRTHQDA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4102g00027 355 MobiDBLite consensus disorder prediction 120 166 - -
Pral4102g00027 355 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4102g00027 355 PANTHER GROWTH-REGULATING FACTOR 5 8 340 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pral4102g00027 355 MobiDBLite consensus disorder prediction 333 355 - -
Pral4102g00027 355 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Pral4102g00027 355 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4102g00027 355 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4102g00027 355 Pfam WRC 80 119 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4102g00027 Pral-Chr4102 175464 176813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4102g00027 7 124 GRF Transcription Factor Family AT3G13960 70.339 1.91e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral4102g00027 WRC 5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4102g00027 - - gmx:100781613 374.785