Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4102g00021 ATGGGAAGGAGGCCGTGTTGTGATAAAGAAGGCGTAAACAGAGGAACCTGGTCTGTGATGGAGGATCAGATCCTTGCCAACTTCATTAAAGTCCACGGAGAAGGAAAATGGAGGGACGTTCCAAGGCGAGCAGGGCTGAATCGATGTGGAAAGAGTTGCAGACTTCGATGGATGAACTATCTTAGGCCAGATATCAAGAGAGGAAACTTTTCTGCAGATGAAGAAGACCTCATTATCAGACTCCATAAGCTCCTGGGCAACAGGTGGTCCTTAATCGCGGGAAGATTACCGGGACGAACAGACAATGACATCAAGAATTTCTGGAACACCAATTTGAGCAAGAGGGCCCATTCGATGGATTATTCCCACAACAACAAACCCTCATCAGATCCAATAATTAGAGCCACCAAAACTATTCCGACCACGTCCCCCTCAACAGCCCCAACGTTAACATCTGCTCAATACACGAGAAACCCCCCCTTCAATGCTTACTGTCCTGCAGATTCTTCTTCCCACCTCAACCCTGTGATTCGAGCAAAAGCAACCAGATGCACCAAGAAAATCATCTTGCCCGAATCCAATGCGGCAGCAGAGTGGGAAACCCAGAATAATACGACTGCTTCTGCACTGGACACTGCACAAGATCTTATGAATGGTTGCTTGTCTTCCTATGGTTTCCTTGACGATTTTGACGTTGATGGCTTGCTCATACCAGAGGTGCCACAAGTGCCTGAAAACATTGATGATGACGAAGCAGCGAATGAATTTGAATACTGTGACTGCGACAACCTTGGTGACAACAACGTTGGAGCTCAGGTCGGCGTGGTCGATGATTATTCCAGAGGAGATGAAGCCGATCTTGCTCAGAATTGGATGGTAGGGCAATTCTTTGAATCTGCAGATGAGGACATGGATTTCTCTTTTCTAAATCTACTAAGTGATGACTCATTCATGGACTCAGGTCCGTCAGGGTTCAGATCAGAATTTGCATCAATGTATAGTCACGAGAAAGGTAGACACAGCATAATATAG 1032 0.4622 MGRRPCCDKEGVNRGTWSVMEDQILANFIKVHGEGKWRDVPRRAGLNRCGKSCRLRWMNYLRPDIKRGNFSADEEDLIIRLHKLLGNRWSLIAGRLPGRTDNDIKNFWNTNLSKRAHSMDYSHNNKPSSDPIIRATKTIPTTSPSTAPTLTSAQYTRNPPFNAYCPADSSSHLNPVIRAKATRCTKKIILPESNAAAEWETQNNTTASALDTAQDLMNGCLSSYGFLDDFDVDGLLIPEVPQVPENIDDDEAANEFEYCDCDNLGDNNVGAQVGVVDDYSRGDEADLAQNWMVGQFFESADEDMDFSFLNLLSDDSFMDSGPSGFRSEFASMYSHEKGRHSII 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4102g00021 343 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 186 - -
Pral4102g00021 343 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pral4102g00021 343 CDD SANT 69 112 IPR001005 -
Pral4102g00021 343 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4102g00021 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral4102g00021 343 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4102g00021 343 CDD SANT 16 61 IPR001005 -
Pral4102g00021 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral4102g00021 343 SMART sant 66 114 IPR001005 -
Pral4102g00021 343 SMART sant 13 63 IPR001005 -
Pral4102g00021 343 Gene3D - 7 67 - -
Pral4102g00021 343 Gene3D - 69 131 - -
Pral4102g00021 343 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4102g00021 343 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral4102g00021 343 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4102g00021 Pral-Chr4102 118204 120383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4102g00021 5 115 MYB Transcription Factor Family AT3G13540 72.072 2.26e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4102g00021 Myb_DNA-binding 9.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4102g00021 K09422 - cave:132165534 236.113