Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4102g00013 ATGGCTGACGAGCAAAGCCCCTTGACACTCTCACCTCCCTCTCCCCCTCCTCCTCCGTCGTCTTCTTCTTCCCCAAACTCCGGCATGACCATGCTGTACTACGGCCTGGCGGTGGTCGGAACCGCCGCCATAGTGTTAGCCATGTACAACCTCATCATCATCAGACGGTGCAGCCGCAGCCGGCGGCAGCTGCAAGGGACAGGGGACGACCGGGAGGTGGAGGTGGTGATCGGGCCCGGAAGTAGCAGCCGGAGCTTTGAATGCTCGAACAGGAACTTGCTTTCGAGCTTCAGGTATAAGAAAGAAGCAAAAGAGAAGGAAGGAGGAGGAGGAAGAGGTGAAGAATATGAATGCCCAGTTTGCTTATCGGTGTTCGAAGAAGGCGAAGAAGTGAGGAAGCTACCTCAGTGTAATCATTCGTTTCATGCGATGTGTATAGACATGTGGCTTTATTCTCACTTGGATTGCCCAATCTGTCGAACACCTGTTGGGATAACAGAGTGA 504 0.5357 MADEQSPLTLSPPSPPPPPSSSSSPNSGMTMLYYGLAVVGTAAIVLAMYNLIIIRRCSRSRRQLQGTGDDREVEVVIGPGSSSRSFECSNRNLLSSFRYKKEAKEKEGGGGRGEEYECPVCLSVFEEGEEVRKLPQCNHSFHAMCIDMWLYSHLDCPICRTPVGITE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4102g00013 167 CDD RING-H2_EL5-like 118 160 - -
Pral4102g00013 167 MobiDBLite consensus disorder prediction 9 23 - -
Pral4102g00013 167 FunFam RING-H2 finger protein ATL1 73 165 - -
Pral4102g00013 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 165 IPR013083 -
Pral4102g00013 167 SMART ring_2 118 159 IPR001841 -
Pral4102g00013 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 23 163 IPR044675 -
Pral4102g00013 167 Pfam Ring finger domain 117 160 IPR001841 -
Pral4102g00013 167 MobiDBLite consensus disorder prediction 1 25 - -
Pral4102g00013 167 SUPERFAMILY RING/U-box 114 165 - -
Pral4102g00013 167 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4102g00013 Pral-Chr4102 70058 70561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4102g00013 15 165 C3H Transcription Factor Family AT1G72220 32.500 1.43e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4102g00013 - - aprc:113852327 175.637