Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4102g00006 ATGGAGGAAATATCTTCGGCGGTTGCAGTGCCATTCACTCTTGGGAATTTGATCCCTAAGGACTCATCAGTGACAAAACACATGGATATTGCTGGATTAAAATTTATGGCAAGTACAGCAACACTGATATTAAATCCTGCAATGGAGAGCTTTGGATCTGTTGGAAGTGATGAAAATTCGACAGATGCTAGTCCACAACATCAGATTACAGTATCTGCAGGGGAAAAAGAGAATCAGGCTGGTGCTTCGCATGTGCCAGAAATGTTCATTAAATGTAACCGTAATTGGACCTCAAATGAAACCCATAATCAGGGAGGGAGGGAAGATGAACACGGGTTAGGGGTTGATTTTCGATGTCTGCATGATTCAAGGTCTCAGTCTATGGCCTGTGAGAATTGCGGTATCCTTGGGGAGAAATCTTCAACTTCAGAGATTGATATACCTAATGCCATGGAGGTTGAAGATAATGCCCATGGTATGTACAGTTTGAACGATTCATATACTGTGCAGGAGCCGGTGCAAGACATTGTTTCTGTTCGAACAGATCCTGAGAGTGAAGATGGCAGTGGGTCGGATGGGTCTGATCCAAAACTAATTGCCCCACCTCTTGAGATGCCAACGGAGGAAAAAGTGTGCAGAGCAAGCTTCCAGAAGACTCTGGATTTGAATAGTGGACCTCTTTGGGGCTTTTCATCTATTTGTGGAAGGAGACAGGAGATGGAGGATGCTATTGCTGCAAATCTTCACCTTTTGCAAGTTCCTTCCCATATGCTAATGGACAACACTGGGCATGAAAACACTGAAAACTCAGTTGCCCACTTTTTTGCTGTCTATGATGGACATGGTGGCTGTCAGGTTGCTAATTATTGCCGGGAGCGTCTTCATTCAGTGCTTGTTGAGGAGTTACAAGATGCAGACTCGAGTTTGGATGGAATTAGTTGGACGGACCATTGGAAGAAAGCATTTTCCAATTGTTTCCGGAAAGTTGATGACGAAGTTGGAGGAATTCATGCTGAGAACAATGAAATCAATAATGATGGATCAGAATCTAGCATGGAACCACTTGCTCCTGAAACTGTTGGTTCTACTGCAGTGGTTGTCATTTTATGCCAAAACCACTTAATAATTGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGTCGTGGAAAAGAAGCGCTGCCATTATCTTCTGATCACAAACCAAATAGAGAGGATGAGTGGGCCAGGATAGAAGCTGCGGGAGGAAGGATCATACAATGGAATGGATACCGGGTGCTCGGCGTCTTGGCAGTGTCAAGATCCATAGGTGATAGGTACTTAAAGCCATGGATAATACCTACACCAGAAGTGAAGTTCGTCCGTAGGGAGAAAAAGGATGAGTGCCTAATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAAGCCTGCGAGATTGCACGAAAACGAATCCTTCTTTGGCACAAGAAACATGGCAATGGCGGATCGACAGGGCCAGGAGAGGGAGTTGATCCTGCAGCACAGTCTGCTGCAGAGTACTTATCTGGAGTTGCTCTCCAAAGAGGAAGCAAAGATAACATTTCTGTTATAGTGATAGACTTGAAGGGTAGAAGGAAATTTAAGACCAAGGCATGA 1641 0.443 MEEISSAVAVPFTLGNLIPKDSSVTKHMDIAGLKFMASTATLILNPAMESFGSVGSDENSTDASPQHQITVSAGEKENQAGASHVPEMFIKCNRNWTSNETHNQGGREDEHGLGVDFRCLHDSRSQSMACENCGILGEKSSTSEIDIPNAMEVEDNAHGMYSLNDSYTVQEPVQDIVSVRTDPESEDGSGSDGSDPKLIAPPLEMPTEEKVCRASFQKTLDLNSGPLWGFSSICGRRQEMEDAIAANLHLLQVPSHMLMDNTGHENTENSVAHFFAVYDGHGGCQVANYCRERLHSVLVEELQDADSSLDGISWTDHWKKAFSNCFRKVDDEVGGIHAENNEINNDGSESSMEPLAPETVGSTAVVVILCQNHLIIANCGDSRAVLCRGKEALPLSSDHKPNREDEWARIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPTPEVKFVRREKKDECLILASDGLWDVMTNEEACEIARKRILLWHKKHGNGGSTGPGEGVDPAAQSAAEYLSGVALQRGSKDNISVIVIDLKGRRKFKTKA 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4102g00006 546 CDD PP2Cc 229 536 IPR001932 -
Pral4102g00006 546 SUPERFAMILY PP2C-like 223 538 IPR036457 -
Pral4102g00006 546 PANTHER PROTEIN PHOSPHATASE 180 536 IPR015655 GO:0004722|GO:0006470
Pral4102g00006 546 Gene3D - 215 546 IPR036457 -
Pral4102g00006 546 ProSitePatterns PPM-type phosphatase domain signature. 274 282 IPR000222 GO:0043169
Pral4102g00006 546 SMART PP2C_4 217 534 IPR001932 -
Pral4102g00006 546 Pfam Protein phosphatase 2C 229 529 IPR001932 -
Pral4102g00006 546 MobiDBLite consensus disorder prediction 181 201 - -
Pral4102g00006 546 FunFam Protein phosphatase 2C 51 221 544 - -
Pral4102g00006 546 SMART PP2C_SIG_2 248 536 IPR001932 -
Pral4102g00006 546 ProSiteProfiles PPM-type phosphatase domain profile. 227 536 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4102g00006 Pral-Chr4102 27137 30816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4102g00006 207 545 PP2C-type Phosphatase Gene Family AT4G26080 58.621 3.48e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4102g00006 K14497 - gmx:100802159 620.542