Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4100g00002 ATGGGTTTGAGCTCGATATTTGGGAGTTGCTTCAAGGGGGAGGGTCAGGCGGCGGTGCCGGCCTACAAGGCCAAGGTGGTGGCCACCAAGCAGAGTTCGTACCCTTGGGTTTCTGTGTCGGATTTGAGCAACCCGATCAGCGCGTCGCTGTCTGAGGATCTGTCGGTGTCGCTGGCCGGATCGAATCTGTATGTGTTTTCGCTGGCGGAGATGAAGCTGATCACTCAGGGTTTCTCGTCCGGTAACTTTCTCGGAGAAGGTGGGTTCGGACCCGTGCATAAAGGCTTCATCGACGACAAGCTCCGGCCGGGTCTCAAGGCTCAGACCGTCGCCGTTAAGCTCTTGAACCTGGACGGCTCTCAGGGCCACAAGGAGTGGTTGACGGAAGTTGTTTTTCTGGGCCAACTAAGACACTCACATCTCGTCAAACTGATTGGATATTGCTGCGAAGAAGAACACAGGCTTCTGGTCTATGAATATCTGCCCAGAGGCAGCTTAGAGAATCAGCTCTTCAGAAGATACTCAGTATCATTGCCATGGTCAACAAGAATGAAGATTGCAGTGGGAGCTGCAAAAGGTCTAGCCTTCCTTCATGAAGCAGCCAAACCAGTCATTTACAGAGATTTCAAAGCTTCAAACATCTTACTAGACTCAAATTACAATGCAAAGCTATCTGATTTTGGGTTGGCAAAAGATGGCCCCGAGGGAGACGACACCCACGTGTCGACCCGAGTCATGGGAACTCAAGGCTACGCGGCTCCGGAATATGTCATGACGGGTCATTTGACATCAAAGAGTGATGTTTATAGTTTCGGGGTGGTTCTGTTAGAGCTTCTAACAGGAAGAAGATCGGTGGACAAAACCAGGCCGGCCAGAGAACAAAACCTAGTGGAATGGGCAAGGCCGATGCTTCACGATACAAGGAAGCTGGGAAGGATCATGGACCCTAGACTTGAAGCTCAATACTCTGAGATGGGTGCGGCCAAAGCGGCGGCATTGGCTTACCAGTGCTTGAGCCACAGGCCTAAGAACAGGCCAACCATGAGCCAAGTGGTCAAGACCCTGGAGCCACTTCAGGACTTCGACGACGTCCCCATCGCGCCCTTCGTCTACACTGTTCCCGCCGGCGATCTTAACGATTGCAGCGAGCCACCGCCAAGAGAGAGAAAGAATCATCATCGTCGTCACAAACACCCTCTGCGATCACCCACGTCGCCGCCAGATCAGTCGGCGAATTCACAGTCCAGGAACGGAAGCTCGTCGTCAAGTGCAAGTGGCTCGAACTCACCGAATTCACGCCACAATAAGGCCAGGGGAGCCTGA 1323 0.5299 MGLSSIFGSCFKGEGQAAVPAYKAKVVATKQSSYPWVSVSDLSNPISASLSEDLSVSLAGSNLYVFSLAEMKLITQGFSSGNFLGEGGFGPVHKGFIDDKLRPGLKAQTVAVKLLNLDGSQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAVGAAKGLAFLHEAAKPVIYRDFKASNILLDSNYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTSKSDVYSFGVVLLELLTGRRSVDKTRPAREQNLVEWARPMLHDTRKLGRIMDPRLEAQYSEMGAAKAAALAYQCLSHRPKNRPTMSQVVKTLEPLQDFDDVPIAPFVYTVPAGDLNDCSEPPPRERKNHHRRHKHPLRSPTSPPDQSANSQSRNGSSSSSASGSNSPNSRHNKARGA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4100g00002 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pral4100g00002 440 MobiDBLite consensus disorder prediction 375 440 - -
Pral4100g00002 440 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4100g00002 440 Gene3D Phosphorylase Kinase; domain 1 42 160 - -
Pral4100g00002 440 Gene3D Transferase(Phosphotransferase) domain 1 161 365 - -
Pral4100g00002 440 FunFam Serine/threonine-protein kinase BIK1 45 160 - -
Pral4100g00002 440 PANTHER OS01G0588500 PROTEIN-RELATED 57 359 - -
Pral4100g00002 440 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Pral4100g00002 440 FunFam Probable serine/threonine-protein kinase PBL8 161 370 - -
Pral4100g00002 440 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
Pral4100g00002 440 MobiDBLite consensus disorder prediction 403 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4100g00002 Pral-Chr4100 22471 24969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4100g00002 65 355 Glycoside Hydrolase AT3G07070 53.741 9.82e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4100g00002 PK_Tyr_Ser-Thr 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4100g00002 - - mtr:25494166 630.943