Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4100g00001 ATGGAGTTTTCTTCTTGGTTTTCCATAGCAGTGTCATGTCTTGTTCTTATTTCCTTAGCCATCATCACAAAACTTCACTTCCGGAGACCAAACCCTAACCTTCCTCCAGGTCCAAAACCTTGGCCGATTATCGGAAACCTAAACCTAATCAGCGAGCTTCCTCACCAGTCCCTTCACAACTTGTCCAAAAAATATGGTCCCATCATGCGCCTCAAGTTTGGATCCTTTCATGTTGTTGTTGCTTCTTCCAGTGAAATGGCGGAGCAGTTTCTGAAAACCCACGATCACGTCTTTGCCACCAGACCCCAAACTGCTTCGGGCAAACACACTTGTTACGACCATTCCAACGTCACTTGGGCTCCTTACGGGCCACAGTGGCGTCTAGGTCGTAAGATTTATCTCACAAAGTTGTTCAGTTCAAAGGGACTTGAGTCTTATCATGAGATACGCGCACAAGAGAGACACGCGTTTATGTCTCGATTGTTTGCTGTTTCGGGGAAGCCCGTTGTTCTGAAAGACCATCTCTTCCATTTTACTCTGAGTGTAATTAGTAGGATAGTGATGGGGAAAAAGTATTTTAGTGAGTCGAAGGTGGAGGATGATGAGGAGTTTGTGGTGTCACGTGAGGGGTTTCAAGAGATGTTGGAGGAGTTGTTTTTGCTTAATGGGGTGTTCAATATTGGGGACTGGATTCCTTGGTTGGGATTCTTGGATTTGCAAGGCTATGTCAAGAGAATGAAGGATCTGAGGAAGAGATTTGATAGATTTTATAAGCATGTTATTGATGATCATATGGCTAGAAGAACCCAGATCGGCTTTGTGCCCAATGATTTCTTGGATTTCTTACTGGGTTTGGTTAAGGATCCTTCTCTTGAAGTTGATTTCACTCTTAACGGTGTCAAAGCCTTCGCTCTGGACCAGATGGCTGGAGGGACAGATACAGCAGCAACGACAGTGGAATGGGCAATGTCAGAGTTAATGAAGAATCCCAATATATTAAAGAAGGCAAACGAAGAAATTGACAGAGTGGTGGGAAGGGGAAGATGGGTTGAAGAGAGTGATATCCCAAACCTTCCATACTTAAACGCAATCATTAAAGAAACACTGAGGCTTCATCCTGTGGCTGTGCTTCTTGCACCACACATGGCTCTTGAGGACTGCAAGGTTGAAGGCTATGACATCAAGAAAGGAACAATGTTGTATGTGAATGCTTGGAGTATTAGCAGAGACCCTTCAATATGGGAGTGTCCAGCAGAGTTCTGTCCAGAGAGATTCTTAGGGGAGAAGAAGGAGATTGATTTCAAGGGACAGAACTTTGAGTTCCTGCCCTTTGGATCCGGGAGAAGGATGTGTCCGGGTTATAAGCTTGGATTGAAGATGGTAAGTTCAGGCTTGGCCAACTTGTTGCATGGATTCAATTGGAGACTTGCTGATCAGAATATGAAGCCGCAGGATTTGGACATGGAAGAACTTTTTGGGTTGGCAACTGTGAGAAAGTTCCCGCTTGTTGCTCTGGCTGAGCCTAGACTCCCCCAATATCTATTTAACTAA 1551 0.4468 MEFSSWFSIAVSCLVLISLAIITKLHFRRPNPNLPPGPKPWPIIGNLNLISELPHQSLHNLSKKYGPIMRLKFGSFHVVVASSSEMAEQFLKTHDHVFATRPQTASGKHTCYDHSNVTWAPYGPQWRLGRKIYLTKLFSSKGLESYHEIRAQERHAFMSRLFAVSGKPVVLKDHLFHFTLSVISRIVMGKKYFSESKVEDDEEFVVSREGFQEMLEELFLLNGVFNIGDWIPWLGFLDLQGYVKRMKDLRKRFDRFYKHVIDDHMARRTQIGFVPNDFLDFLLGLVKDPSLEVDFTLNGVKAFALDQMAGGTDTAATTVEWAMSELMKNPNILKKANEEIDRVVGRGRWVEESDIPNLPYLNAIIKETLRLHPVAVLLAPHMALEDCKVEGYDIKKGTMLYVNAWSISRDPSIWECPAEFCPERFLGEKKEIDFKGQNFEFLPFGSGRRMCPGYKLGLKMVSSGLANLLHGFNWRLADQNMKPQDLDMEELFGLATVRKFPLVALAEPRLPQYLFN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4100g00001 516 PANTHER CYTOCHROME P450 98A9 7 515 - -
Pral4100g00001 516 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 Gene3D Cytochrome P450 23 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 FunFam Cytochrome P-450 19 24 507 - -
Pral4100g00001 516 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 SUPERFAMILY Cytochrome P450 35 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4100g00001 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Pral4100g00001 516 CDD CYP71_clan 66 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4100g00001 Pral-Chr4100 14630 16551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4100g00001 6 516 Cytochrome P450 AT5G07990 42.747 3.47e-141 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4100g00001 - - qsu:111989710 719.924