Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4099g00004 ATGGACGCGCCACAAGATTATTCAAACCTAATGGCCACTCCTTTCTCTAACACTGAGGATTCGTATGTATTCAGCTATATGAATGGACTTTCTCCAATAAAACCAGATAAGCCTGTTCAGCAAAATCAGGCATTAAGCTCCACAATCTTTTGCTCCCCTCCATCTGTTTTCACATCCCCCCATGTCTCCTATCGCAAGGAACATGGAATCCTCCATAGCCACGCTCCTTTTCTGGATTCACCAAAGCCAACTGTTTCATTTGAACGTGGCTTACAAATAAGTTCAGGCGAAGAAGCTGTTTCATACACAGATCTTGCACATCGTGACTCAAGTGAGCTCCAGGAAAGTACTGATCAAGGGAATGCTTTGGTTGAACAATTAAGCAGAAAATGTACACTTGACATGCCAAAGGGTTCAATGTATGATTGTGGGAGCCCTAGTTCTGACGAGACAATTTCTAGCATTGTCCGGGGATTATTTGCACCAGTATCAGAAAATAATGAACGACCAGGATGTGATTGGGAGGGTCTTACTCCCAATGAGACCGGTACTCTTGAGGGTCTGACCCAGAAATCATTGGGTCCCATAATTAGACCTGGTTTTTTTATGCCTCCGTTACCACAAAATAGCTTTAGGAACTCGCACACTGTTGACTCACAATATCAAAGTATAGTCAAAACAGCCACAGAAACTGAGCAAAGGCAGGACAATATTTTCAATTTGGCTGTGATGGCTAGCAACCTCAATGAGAGAATGGATAATGAGATGGCCACCCACAAGACAAATCAGTCCATCCAACTCATCTCCTTCCTTCATGTCTCTACAAGCCAACAGCTTGATCAAATATCACCAATGTATAGAATGCCCCAAAGAGACCTGCATGCCCAAAACGGTTGGACTCAGCCGGCATTAGATTATTCACAACCAACAGCTCTATTTATTGGTGAAGGTTATAATCGAAATAGCTCCAACAGGAAAAGGCGTAAGTCAGAGCCTGCTAAAGAAGGTGAAGGTTGCAAGCATTGCAAATGCAAGGTCTCAAATTGCTTGAAGCTTTACTGCGAGTGCTTTGCTTCTCGCGTCTACTGCGTGGGATCTTGCTCCTGTCGAAACTGCTTCAACAAGCCAATTCATGAAGAAATTGTGCTTAAAACTCGCAAGGACATTGAGTCTCGTAACCCTCTTGCATTTGCTCCCAAAGTCGTCATCACAAATGCTGGTTCTTTACCTGAAACTGGGGCTGATCCAAACAAAACTCCAGCTTCAACAAGACACAGAAGAGGATGCAACTGCAAGAAATCTGGGTGCCAAAAGAAATATTGTGAATGTTACCAGAATGGAGTTGGTTGCTCCATTAGATGCAGATGTGGAGGATGCATGAACGAATATGGGAGAAATTATGGTTCTTCTGAATTAAGAATAGAAACTGAAACCGGAACAAATGAATCCTGTGAAATGGTTATGGCAGAAAAAGCTTCACAGATAAATGAAACTCTAAAAGGAAATCCAAATTCTGCTGCTCCTTCCCCAACATCTGCAGGGTCTCGCAGATCAAGGGCTCCATTGCGTGGTTCATCAAGGAGAAGACAACCTAGTAATTTGATCACTCCAGCTGCTTCTAGATTTCATGCGAGCCTGTTAAACTTTGAATATAATCTCCAAAGCAATCCAGAACTGGAAATTCCAGAGATTCTCCAAGTTGGTGATGGCTCTCCTGTCCCATGCATGAACAACACTTCTAATAGCCCTCCATTTCCTTCTTTCAACCCTCGCCAATAG 1779 0.4317 MDAPQDYSNLMATPFSNTEDSYVFSYMNGLSPIKPDKPVQQNQALSSTIFCSPPSVFTSPHVSYRKEHGILHSHAPFLDSPKPTVSFERGLQISSGEEAVSYTDLAHRDSSELQESTDQGNALVEQLSRKCTLDMPKGSMYDCGSPSSDETISSIVRGLFAPVSENNERPGCDWEGLTPNETGTLEGLTQKSLGPIIRPGFFMPPLPQNSFRNSHTVDSQYQSIVKTATETEQRQDNIFNLAVMASNLNERMDNEMATHKTNQSIQLISFLHVSTSQQLDQISPMYRMPQRDLHAQNGWTQPALDYSQPTALFIGEGYNRNSSNRKRRKSEPAKEGEGCKHCKCKVSNCLKLYCECFASRVYCVGSCSCRNCFNKPIHEEIVLKTRKDIESRNPLAFAPKVVITNAGSLPETGADPNKTPASTRHRRGCNCKKSGCQKKYCECYQNGVGCSIRCRCGGCMNEYGRNYGSSELRIETETGTNESCEMVMAEKASQINETLKGNPNSAAPSPTSAGSRRSRAPLRGSSRRRQPSNLITPAASRFHASLLNFEYNLQSNPELEIPEILQVGDGSPVPCMNNTSNSPPFPSFNPRQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4099g00004 592 MobiDBLite consensus disorder prediction 316 338 - -
Pral4099g00004 592 ProSiteProfiles CRC domain profile. 338 464 IPR005172 -
Pral4099g00004 592 MobiDBLite consensus disorder prediction 572 586 - -
Pral4099g00004 592 MobiDBLite consensus disorder prediction 498 535 - -
Pral4099g00004 592 MobiDBLite consensus disorder prediction 572 592 - -
Pral4099g00004 592 MobiDBLite consensus disorder prediction 321 338 - -
Pral4099g00004 592 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 427 462 IPR005172 -
Pral4099g00004 592 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 340 375 IPR005172 -
Pral4099g00004 592 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 9 253 IPR044522 GO:0003700
Pral4099g00004 592 SMART CXC_2 337 378 IPR033467 -
Pral4099g00004 592 SMART CXC_2 424 465 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4099g00004 Pral-Chr4099 24578 28642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4099g00004 309 509 CPP Transcription Factor Family AT3G22780 58.333 2.49e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pral4099g00004 TCR 1.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4099g00004 - - rcu:8280874 318.546