Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4098g00053 ATGTCGTCGTCGTCGTCGTCGTTCGTACTACCATCTCTTTCAGACAGCGACGGAGGAGCAGAGAAAGAAGACTATGACAGGGACAGAGGGACAAACCATAAAGGTCAGGAGGACGAAGATTTTGCGATGCCTGTTGTGTCCTTTATGTGGGCAGACCATAATCTGCAAGATTTGAGGGATAAAATTTTCCCTCATGAGGAAGAAAATGCTGAGGCACCTGAAAGTGTGCCTGTGCCTTCCTTTCCATTGCCATCCAATTCCAAGAAGAAGGAGAGGGTTCTTCCTTCATTAAGCACCAGTCCAACTAAGCTATCAAGCCATTCTTGTATAGTCGAAAGAAGGGCGAAAACCGCAGCAAAAAAATTTTTGGATGAACAAGAATCTGCTCTTGCTGCCTTTGAGTTGCAGAAAAGATCAGCCGCTAAGAAACATGGAAGACTGGATGGGATAGAAATTTTGGAAGGCTCTCCTAAAAATTTATCAAGAACAAAATCTGTAGCAAGGAAAAAACCCATTCCAAAAGAATACATTCCCTCTACTAGTCAACCTCAGCCTCAAAAAGTAGCAGGAGATAACAAGACAGAACGGGAGCACTGTCAGCCCGAAACTGAAAATGTGACAACTGAAATTGAGAACCAGAAGACTTCCTTAGAACCAGATTTGAACCAGCAAAAAGTGCCCAATGAAAATTCTGAGAAAAATGCTGCTACATGGAAAGGAAAAGCTCCTATGTGGGAGCCCTTGAACTACCTGATGGAAGCTGCAGAAAATGCGAAGTCTACGGAGTCCAACAATATGCAAGCAAATATTAATGTTGCAGTGCCTGTTGAACCTTGCAACAATAATTCCAATCCTACCAAAATTATGGCAGCTAGTGATCAAAATGAGGCAACTCTGGTTCTACCAGATCCCATCAAGGCTAAGGGGTTGAGGATCAAACAACAAAGAAGGGTCAAATTTGCTCAGGACTTAAATATTCCTGCAGAACCTGTATTTGCTGTTTCAAGCATCCAAAGCAACGAAAGAATCACTCCAATATGGTTCTCGTTAGTTGCTTCTGAAGAGAAGGATGTGCGTGCACGCTTGCCACAGATACCTTCCTGCTACCTGAGGGTCAAGGATGTCAATTTACCTGTTTCATTCATCAAGAAGTACATTGTGAAGAAGCTTGGCCTTGCAAGCGAAGATGAGGTGGAAATCTCATTAAGAGGGAAGCCATTGTTACCTTCACTGCAGCTGAAGCACGTAGCAGAGATGTGGTTAGAGACAGTGCCTAAATCTGAGAAGATTCATTCCTTTGTTGGGGACTCGGCAAAGGAGTTTGTGATGGTTCTTTCGTACGGTCGAAAGGTCTAA 1356 0.4351 MSSSSSSFVLPSLSDSDGGAEKEDYDRDRGTNHKGQEDEDFAMPVVSFMWADHNLQDLRDKIFPHEEENAEAPESVPVPSFPLPSNSKKKERVLPSLSTSPTKLSSHSCIVERRAKTAAKKFLDEQESALAAFELQKRSAAKKHGRLDGIEILEGSPKNLSRTKSVARKKPIPKEYIPSTSQPQPQKVAGDNKTEREHCQPETENVTTEIENQKTSLEPDLNQQKVPNENSEKNAATWKGKAPMWEPLNYLMEAAENAKSTESNNMQANINVAVPVEPCNNNSNPTKIMAASDQNEATLVLPDPIKAKGLRIKQQRRVKFAQDLNIPAEPVFAVSSIQSNERITPIWFSLVASEEKDVRARLPQIPSCYLRVKDVNLPVSFIKKYIVKKLGLASEDEVEISLRGKPLLPSLQLKHVAEMWLETVPKSEKIHSFVGDSAKEFVMVLSYGRKV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4098g00053 451 MobiDBLite consensus disorder prediction 91 107 - -
Pral4098g00053 451 MobiDBLite consensus disorder prediction 61 108 - -
Pral4098g00053 451 Coils Coil 123 143 - -
Pral4098g00053 451 MobiDBLite consensus disorder prediction 190 204 - -
Pral4098g00053 451 Coils Coil 251 271 - -
Pral4098g00053 451 MobiDBLite consensus disorder prediction 160 236 - -
Pral4098g00053 451 MobiDBLite consensus disorder prediction 1 41 - -
Pral4098g00053 451 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 51 450 IPR044807 GO:0004842
Pral4098g00053 451 MobiDBLite consensus disorder prediction 205 235 - -
Pral4098g00053 451 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4098g00053 Pral-Chr4098 474926 479660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4098g00053 351 450 C3H Transcription Factor Family AT3G23060 46.000 4.94e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4098g00053 K16277 - mof:131150719 231.106