Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4098g00050 ATGGAACCCGGGGTGACCCCACCCACTCCTCCGGTCATCATTCTCGGCAAATATGAATTGATGGATTTCCTTGGCCGTGGCACCTTCGCAAAGGTTTATCGTGCACGATCTTTAGTTGATGGCTCCACGGTTGCCGTGAAAATCATCAACAAGCTTAAAACTATTGAGTCTTCCATGGAAGATAAGATCATCAGTGAAGTCAATGCAATGTACCGCCTCCATAATCATCCGAACATCCTCAAAATCTACGAAGTCATGGCCACAAAATCCAAAATTTATCTTATCATTGAGTATGCAGCCGGCGGCGACCTCTGCACTGAAATCACCCGGAAGGGCCATTTGAAAGAGAAATTAGCTCGCCGTTACTTTCAGCAACTAGTCTCTGCTCTTTGTTTCTGTCATCAAAACGGTGTGGCTCACCGCGACATCAAGCCTCAGAACCTTCTCTTGGATAAAGACGGCAATTTGAAGGTCTCCGATTTTGGGCTTTCCGCTTTATCAGAAAGTCTCCGAGACCGGCTGCTCCACACAGCTTGCGGTACTCCGGTTTACGCCGCCCCGGAGATACTCCGACGGCGAAGTTACTATGGCGCCCAAGTCGATGCGTGGTCATGCGGGCTCATACTATACGTCATGCTCGCCGGATATCTGCCGTTCAACGACTATAGCATCCCGGCGATGTGCAGAAAGATTGGGTTGCGCGATTATAAGTTCCCGGAGTGGATTTCGAAGCCTGCACGCAACGTGATCTACAATCTGCTCGACCCGAATCCAATCAAGAGGACGAACCTTGAATCGCTGTACGAGGTAGCGTGGTTCAAGAAATCGCTGAAACCAGAAATCGAAAGGAGTGTGTTGAGATCGGGATGGGATTCGTGTGCGAAATCTGAGTTAGGGTTGAATGCTTTTGATATAATATCAATGTCTAGGGGTTTAGATTTGAGACCTTTCTTTGAAACGAACTTAGAGAAGAGGTTCACATCGAAGGCGGAAAAGGAGGTGGTGGTGAAGAAAATGAAAGGAATTGGAGTGAGTTTAGGGTTTAAGATTGAACAAGAGAAGAATGGTTTAATTGGAATGAGGAAAGGAAAAGTGGTTGTAATCGTGGAACTCTTTGAGATTGTGAAAGATTTGTTGCTGGTGACTCTGAAGGCGGATGAAGGTGGTTCAGATTTTGAGGAGATTTACTGGAAAGATTGGAAAGTTGGACTTGAAGAACTTGTTCTTTCTTGGCTAGACGAAGCACTGTGA 1251 0.4652 MEPGVTPPTPPVIILGKYELMDFLGRGTFAKVYRARSLVDGSTVAVKIINKLKTIESSMEDKIISEVNAMYRLHNHPNILKIYEVMATKSKIYLIIEYAAGGDLCTEITRKGHLKEKLARRYFQQLVSALCFCHQNGVAHRDIKPQNLLLDKDGNLKVSDFGLSALSESLRDRLLHTACGTPVYAAPEILRRRSYYGAQVDAWSCGLILYVMLAGYLPFNDYSIPAMCRKIGLRDYKFPEWISKPARNVIYNLLDPNPIKRTNLESLYEVAWFKKSLKPEIERSVLRSGWDSCAKSELGLNAFDIISMSRGLDLRPFFETNLEKRFTSKAEKEVVVKKMKGIGVSLGFKIEQEKNGLIGMRKGKVVVIVELFEIVKDLLLVTLKADEGGSDFEEIYWKDWKVGLEELVLSWLDEAL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4098g00050 416 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4098g00050 416 SUPERFAMILY Protein kinase-like (PK-like) 14 311 IPR011009 -
Pral4098g00050 416 CDD STKc_AMPK-like 17 265 - -
Pral4098g00050 416 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Pral4098g00050 416 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Pral4098g00050 416 Pfam NAF domain 300 351 IPR004041 GO:0007165
Pral4098g00050 416 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Pral4098g00050 416 CDD CIPK_C 301 404 - -
Pral4098g00050 416 Gene3D Kinase associated domain 1, KA1 301 409 - -
Pral4098g00050 416 FunFam Maternal embryonic leucine zipper kinase 13 287 - -
Pral4098g00050 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pral4098g00050 416 SMART serkin_6 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4098g00050 416 FunFam Non-specific serine/threonine protein kinase 7 100 - -
Pral4098g00050 416 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 384 - -
Pral4098g00050 416 ProSiteProfiles Protein kinase domain profile. 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4098g00050 Pral-Chr4098 453953 455203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4098g00050 7 411 CBL-interacting serine-threonine protein kinases AT4G14580 55.370 3.68e-149 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral4098g00050 Pkinase 7.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4098g00050 K12761 - qsa:O6P43_021501 515.383