Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4098g00043 ATGTCTGCGTGTTTAAGCGGAGCTAGTGGAAGAACTTATGGGTTCGATTTCGATTTTGTCAAATCTCCGTCTACATCGACCCGAACTACATCTTCTTCTCCTTCTTCAACTATCTCGGAATCGAGCGATTCTCCGCTTGCTATCTCCACTCGAAAATCTCGAACCCCTCGAAAGCGACCCAACCAAACTTACAATGAAGCTGCCGCAATGCTTTCGACAGCATACCCAAATCTCTTCCCCTCCGAAAGCCTAAAAAAACCAGGCAAGTTCACCAAAACAATCGATAACTTTGCGGATGAATCTTCAGAATTGTTCTTCCCTTTCCAAATATTTGATACCTCCTCTTTCCTACTTCAGCACCAACCAATCCAACAGAAGCCTGTTAAATTTCCAGTAGAGCCCAAAGCGGTTAATCTGACAGAAAAATCGTGCCAAAGTCCTGGGGAGATTAGCTCCGGAGTAAATACTCAAGAATTCGACGATGATTGCCGAGAAGATTTCGATGCTGAATCGATTCTCGATGAGGAAATCGGGGAGGGAATCGATAGCATCATGGGCAGCAGGGCCGAAGATTCCCATGGCGCGTCTTGTCACGACGAACACGTGAATCACCGGACTGCGGATTCGACGGGATTTAATTTTGGCGGGAAATTCGATTTCCGGCTAAGAGCTCTCCGCGGGGTCGATGAAGGGAATTATTGGTGGAGCTTTCCCGCTGTTGTCAACATGCTCGAAATCTCACCAGAAATCAAAAAGCCTACTCCGGCAGCATCAACTTCGCCGGAGAAGAAGAAAAAGAAGAAGACGAGGAAGGTGGAAAAGCTGACGACCATCGAGTCAAAGATTCCGGAGTTGCCGAAGGAGAGTTCGATTCCGAAGGAGAAATCAAATCCTGGCTTGCTGTTGAAATTGAATTACAACGAGGTTCTTAATGCTTGGTCTGACCGGAGTTCACCGTTCACCGGCGAAAGTCCCGCCTCTGATGTGCACGGAAATGATGTCGCGGCACGGCTGGCACAAATAGATTTGTTGTGGGAGAGTGGCGAAGGAGGCGTGATGAGAGAAGCCAGCGTGTTGCGCTACAAAGAAAAGCGACGGACCCGGCTCTTCTCTAAGAAGATTAGATATCAAGTGAGGAAAGTCAACGCTGATCAACGGCCCAGAACGCAGGGACGATTTGCGAGGAGGCCCAATTGTTGCTCTAACGCACAAAGCTCAAAGTGCAAAGGCAGTAAAGCAGGCCTTGCGTCCGATCACTGTCGACCATAA 1269 0.4846 MSACLSGASGRTYGFDFDFVKSPSTSTRTTSSSPSSTISESSDSPLAISTRKSRTPRKRPNQTYNEAAAMLSTAYPNLFPSESLKKPGKFTKTIDNFADESSELFFPFQIFDTSSFLLQHQPIQQKPVKFPVEPKAVNLTEKSCQSPGEISSGVNTQEFDDDCREDFDAESILDEEIGEGIDSIMGSRAEDSHGASCHDEHVNHRTADSTGFNFGGKFDFRLRALRGVDEGNYWWSFPAVVNMLEISPEIKKPTPAASTSPEKKKKKKTRKVEKLTTIESKIPELPKESSIPKEKSNPGLLLKLNYNEVLNAWSDRSSPFTGESPASDVHGNDVAARLAQIDLLWESGEGGVMREASVLRYKEKRRTRLFSKKIRYQVRKVNADQRPRTQGRFARRPNCCSNAQSSKCKGSKAGLASDHCRP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4098g00043 422 Pfam CCT motif 354 396 IPR010402 GO:0005515
Pral4098g00043 422 MobiDBLite consensus disorder prediction 395 411 - -
Pral4098g00043 422 MobiDBLite consensus disorder prediction 19 51 - -
Pral4098g00043 422 MobiDBLite consensus disorder prediction 382 422 - -
Pral4098g00043 422 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 12 399 - -
Pral4098g00043 422 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Pral4098g00043 422 MobiDBLite consensus disorder prediction 251 273 - -
Pral4098g00043 422 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4098g00043 Pral-Chr4098 385051 388178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4098g00043 300 396 C2C2-CO-like Transcription Factor Family AT1G73870 46.847 2.98e-21 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4098g00043 CCT 1.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4098g00043 - - qsa:O6P43_022368 461.84