Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4098g00030 ATGAGTCTCTTGAAGAATTTGCCTCGTGACATTGAGGCCGGAAGTAGCAGCCACGGCGATAATGACGATGCGGAAAGTTCGTCTGATCCGTTTGTTATTCCCAGAACAAAGGATGCTCCTATTGAACGCCTCAAACGTTGGAGGCAAGCTGCACTTGTGCTTAATGCTTCTCGACGGTTCCGCTACACGTTGGACTTGAAAAAAGAAGAGGAGAATCGGCAAATATTGGCGAAGATTAGGGCTCATGCGGAAGCAATTAGAGCTGCATATCTGTTCAAAGGTGCTATAACAAACGGGGAAAATGAAATCCCACTTCCTCCTCCAACCCCAGTTGGTGAGTTTGGTATTGGAAATGAACAGCTTCTTTCAATTTCTAGGGATCATAAAGCTGGTGTTCTCGAGCAATATGGAGGGGCTAGAGGGCTATCAGAATTGTTGAAATCTAGTACAGAGAAGGGGATTAATGGCGATGATGCAGATCTATTAAAACGAAGGAATGCTTTTGGTTCAAACAATTATCCTCAAAAGAAAGGAAGGGGTTTCTTGATGTTTGTGTGGGATGCTTGCAAGGATCTGACCTTGATTATATTAATGGTGGCTGCAGCAGCTTCATTAGCACTAGGAATAAAAACTGAGGGAATTAAGGAAGGATGGTTTGATGGAGGAAGCATTGCTTTTGCAGTAGTTCTTGTTATTGTTGTTACAGCTATAAGTGACTATAAACAGTCTCTCCAGTTTCAACATCTAAATGAGGAAAAAAGAAATATACATTTAGAGGTTATAAGAGGTGGTAGAAGAGTTGAGATCTCTATTTATGACATCGTTGTTGGTGATGTTGTGCCCCTTAATATTGGTAATCAGGTCCCTGCCGATGGCATCTTGATCACCGGTCACTCTCTTGCTATTGATGAATCAAGTATGACTGGAGAGAGCAAGATGGTCTATAAGGGCTCTAAAGACCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGTACCATGCTGGTACTAGGTGTTGGTTTAAATACTGAATGGGGGCTTCTGATGTCTAGCATTTCAGAAGACAATGGTGAAGAAACGCCCTTACAGGTACGTTTAAATGGTGTTGCCACTTTCATTGGCATTGTTGGACTCTCTGTTGCTGCTATTGTTTTGATTGTGTTGTTGGCCAGATATTTCTCTGGGCATACTAGAGATGCACATGGAAACGTTGAATTTAAGGCAGGCAAGACAAAAGTTGGTGATGCAATTAATGGGGCAATTAAAATAGTTACAGTTGCGGTGACCATCGTTGTAGTTGCAGTTCCTGAAGGGCTTCCTCTAGCAGTTACCTTAACACTTGCCTACTCGATGAGAAAAATGATGGCGGACAAAGCTTTGGTGAGGAGGCTTTCAGCCTGTGAGACAATGGGCTCTGCCACAACCATTTGCAGTGATAAGACTGGTACATTGACCATGAATCAGATGACTGTGGTTGAGGCTTACATTGGTGGGAAGAAGATTGGTCCACGTCACGACAAGTCAGAGCTTTCTCCGAATCTGTGCACTTTGATCATTGAAGGTCTCGCACAGAACACCAATGGTAGTGTCTACAGGGTTGGGGGTGATGTTGAGGTTTCTGGATCACCAACAGAGAAGGCAATTTTACATTGGGGAATTAAGCTGGGGATGGATTTTGAGGCTGTCAGATCAGAGTCATCAATTCTCCATGTTTTTCCATTTAATTCAGACAAGAAGCGCGGAGGAGTTGCAGTAAAGACGCTTGACTCTCAAGTTCATATACATTGGAAAGGCGCTGCTGAGATAGTCCTAGCCTGTTGTACATGGTATATTGATGCAAGTGGCCAGTTAGTGAAGATGGATGAGAAGATGGCATTTTTTCAAAAAGCTATTGAAGATATGGCTGCTGAGAGTTTACGTTGTGTTGCCATGGCATATAGATCATATGAAATGAAAGGTGTTCCAACTAGTGAAGAAGAACTTGCTCACTGGTCATTACCAGAGGATGATCTCATTTTACTGGCTATTGTCGGTCTGAAGGATCCCTGTCGACCTGGTGTCAAAGATGCTGTGCGACTTTGCCAAAAAGCTGGAGTTGAGGTACGGATGGTGACTGGTGACAATATAAAAACTGCTAAATCAATTGCTGTAGAGTGTGGAATACTTGGATCAAAAGTTGTGGAGCCGATCATCATTGAAGGAAAAGTGACAAATATCGATGAAAGGCCAAACGTCATTGAAGGAAAATCGTTTCGTTCATTGTCAGATGATCAGAGAGAAAAATTTGCCCAAAGTTTATTGGTCATGGGACGGTCTTCTCCCAATGACAAGCTTCTGCTTGTGCAAGCATTAAGGAGGACGGAACATGTTGTGGCTGTTACTGGGGACGGAACTAACGACGCTCCGGCCCTACATGAGGCCGATATAGGTCTTGCAATGGGTATTCAAGGGACAGAAGTTGCTAAAGAGAGCTCAGATATCATTATTTTGGACGATAATTTTGCTTCGGTTGTGAAGGTTGTCAGGTGGGGACGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAACTCACTGTCAATGTTGCAGCCCTTGTTATTAACGTTATTTCTGCGGTTTCCTCTGGCGATGTCCCACTAAATGCAGTACAGCTTCTTTGGGTAAATCTTATCATGGATACACTTGGAGCACTGGCCTTGGCAACTGAACCACCTACAAATCATTTGATGGATCGGCCTCCAGTTGGTAGAAGGGAACCTCTTATAACAAACATCATGTGGAGGAATCTGCTTATACAGGCAGCGTATCAAGTGTCTGTTTTACTTGTACTGACTTTCCGAGGTACGACTTTATTGAATCTGAAGCACCACTCTGACGCTACCAAAGCGAAGAACACCGTAATATTCAATGCATTTGTTCTCTGTCAAGTTTTTAATGAATTTAATGCCCGAAAGCCAGATGAAAATAACATATTCAAGGGGATCACAAAAAACTACCTCTTTATGGGGATAGTGGCTCTAACTCTCATACTTCAGGTCATCATCATTGAATTCCTTGGGAAGTTCACATCGACAGTGAGGCTTAATTGGAAGCAGTGGCTCATCTGCGTCATCATTGGAATTATCAGCTGGCCTCTTGCGTTTTTTGGCAAATTCATACCCGTGCCAAGGAGTGAGTGTCACAGGTGGTTTTATAGTCTCGTTCGAAGGAAACCAAAAGAATAA 3234 0.4298 MSLLKNLPRDIEAGSSSHGDNDDAESSSDPFVIPRTKDAPIERLKRWRQAALVLNASRRFRYTLDLKKEEENRQILAKIRAHAEAIRAAYLFKGAITNGENEIPLPPPTPVGEFGIGNEQLLSISRDHKAGVLEQYGGARGLSELLKSSTEKGINGDDADLLKRRNAFGSNNYPQKKGRGFLMFVWDACKDLTLIILMVAAAASLALGIKTEGIKEGWFDGGSIAFAVVLVIVVTAISDYKQSLQFQHLNEEKRNIHLEVIRGGRRVEISIYDIVVGDVVPLNIGNQVPADGILITGHSLAIDESSMTGESKMVYKGSKDPFLMSGCKVADGSGTMLVLGVGLNTEWGLLMSSISEDNGEETPLQVRLNGVATFIGIVGLSVAAIVLIVLLARYFSGHTRDAHGNVEFKAGKTKVGDAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYIGGKKIGPRHDKSELSPNLCTLIIEGLAQNTNGSVYRVGGDVEVSGSPTEKAILHWGIKLGMDFEAVRSESSILHVFPFNSDKKRGGVAVKTLDSQVHIHWKGAAEIVLACCTWYIDASGQLVKMDEKMAFFQKAIEDMAAESLRCVAMAYRSYEMKGVPTSEEELAHWSLPEDDLILLAIVGLKDPCRPGVKDAVRLCQKAGVEVRMVTGDNIKTAKSIAVECGILGSKVVEPIIIEGKVTNIDERPNVIEGKSFRSLSDDQREKFAQSLLVMGRSSPNDKLLLVQALRRTEHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVISAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRPPVGRREPLITNIMWRNLLIQAAYQVSVLLVLTFRGTTLLNLKHHSDATKAKNTVIFNAFVLCQVFNEFNARKPDENNIFKGITKNYLFMGIVALTLILQVIIIEFLGKFTSTVRLNWKQWLICVIIGIISWPLAFFGKFIPVPRSECHRWFYSLVRRKPKE 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4098g00030 1077 FunFam Calcium-transporting ATPase 39 95 - -
Pral4098g00030 1077 CDD P-type_ATPase_Ca_PMCA-like 161 929 - -
Pral4098g00030 1077 NCBIfam calcium-translocating P-type ATPase, PMCA-type 129 1058 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pral4098g00030 1077 Pfam Ca2+-ATPase N terminal autoinhibitory domain 29 71 IPR024750 GO:0005516
Pral4098g00030 1077 FunFam Calcium-transporting ATPase 187 244 - -
Pral4098g00030 1077 SUPERFAMILY HAD-like 477 901 IPR036412 -
Pral4098g00030 1077 Gene3D - 187 1046 - -
Pral4098g00030 1077 Gene3D - 40 94 - -
Pral4098g00030 1077 FunFam Plasma membrane calcium-transporting ATPase 2 682 841 - -
Pral4098g00030 1077 FunFam Calcium-transporting ATPase 9 plasma membrane-type 333 503 - -
Pral4098g00030 1077 Pfam Cation transporter/ATPase, N-terminus 137 204 IPR004014 -
Pral4098g00030 1077 Pfam Cation transport ATPase (P-type) 537 610 - -
Pral4098g00030 1077 SFLD Haloacid Dehalogenase 461 848 - -
Pral4098g00030 1077 PRINTS P-type cation-transporting ATPase superfamily signature 479 493 - -
Pral4098g00030 1077 PRINTS P-type cation-transporting ATPase superfamily signature 699 709 - -
Pral4098g00030 1077 PRINTS P-type cation-transporting ATPase superfamily signature 303 317 - -
Pral4098g00030 1077 PRINTS P-type cation-transporting ATPase superfamily signature 677 688 - -
Pral4098g00030 1077 PRINTS P-type cation-transporting ATPase superfamily signature 796 815 - -
Pral4098g00030 1077 PRINTS P-type cation-transporting ATPase superfamily signature 820 832 - -
Pral4098g00030 1077 Pfam Cation transporting ATPase, C-terminus 881 1055 IPR006068 -
Pral4098g00030 1077 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 486 681 IPR023299 GO:0000166
Pral4098g00030 1077 SFLD p-type atpase 461 848 IPR044492 -
Pral4098g00030 1077 Gene3D - 160 355 - -
Pral4098g00030 1077 Gene3D - 489 684 IPR023299 GO:0000166
Pral4098g00030 1077 ProSitePatterns E1-E2 ATPases phosphorylation site. 481 487 IPR018303 -
Pral4098g00030 1077 NCBIfam HAD-IC family P-type ATPase 419 503 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4098g00030 1077 NCBIfam HAD-IC family P-type ATPase 764 876 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4098g00030 1077 PRINTS Sodium/potassium-transporting ATPase signature 472 493 - -
Pral4098g00030 1077 PRINTS Sodium/potassium-transporting ATPase signature 222 242 - -
Pral4098g00030 1077 PRINTS Sodium/potassium-transporting ATPase signature 596 614 - -
Pral4098g00030 1077 SUPERFAMILY Calcium ATPase, transduction domain A 257 352 IPR008250 -
Pral4098g00030 1077 FunFam Calcium-transporting ATPase 813 1060 - -
Pral4098g00030 1077 PANTHER CATION TRANSPORTING ATPASE 88 1058 - -
Pral4098g00030 1077 SUPERFAMILY Calcium ATPase, transmembrane domain M 137 1058 IPR023298 -
Pral4098g00030 1077 FunFam Calcium-transporting ATPase 489 684 - -
Pral4098g00030 1077 FunFam Calcium-transporting ATPase 234 355 - -
Pral4098g00030 1077 SMART Cation_ATPase_N_a_2 136 209 IPR004014 -
Pral4098g00030 1077 MobiDBLite consensus disorder prediction 1 35 - -
Pral4098g00030 1077 Pfam E1-E2 ATPase 257 457 - -
Pral4098g00030 1077 Gene3D - 476 841 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4098g00030 Pral-Chr4098 248323 267948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4098g00030 2 1059 Primary Pumps ATPases AT5G57110 73.059 0.0 1566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4098g00030 K01537 - qsa:O6P43_022381 1637.08