Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4098g00024 ATGGCTGTAGATCTGGTGGGCCTTCCACGGAAGATGGAAGAACAGATGGCTATTCAAGAGGCTGCTTCGGCTGGATTGAAGAGCATGGAACACCTTGTTCGTCTTCTTAATTCTTCCCAATCTTCCGTTTCTGATAATAATCCCCACCGCCTTGACTGTACCCACCTCACCGACATGACCGTTTCCAAGTTCAAGCAAGTCATCAATTTACTGAATCGCACCGGCCACGCCCGCTTCCGTCGTGCTCCTTCCAATAATCCTAACCCCCGTTCCTCGTCTTCTTCGCCTTCTGCTGCTCCTGCTCTTCCTAATCCGTCTCAGTCGAACCACCTCGCTCTGAATTCGGCTCAGTCATCTCACTCTCAGGGTTTGACCCTTGATTTTGCCAAGCCCTGTAAGGTCAAGACGGCGCCGCTTAAACCTTCCACCGAGTTATCCGGGTCTCAGTACTCTAAGGACACCTTTAGTATCTCCCCTCCCATGTCCACCACGAGCTCCTCCTTCATGTCTTCTATCACCGGAGACGGCAGCGTTTCCGATGGGAAAATAGGCCCCTCGCTATTTCCTCCACCTGCTCCCGTCTCCGCTGGTAAACCTCCTCTCTCCTCGTCTCACCGTAAAAGGTGTCATGATTCCGCCTTTCATGAGAAAACTTCCTCCTCCGGTCACTGTCATTGCTCTAAGAGAAGAAAATCGCGAGTCAAAAAGACAATTCGTGTGCCGGCCATAAGTTCGAAGATCGCTGATATTCCGCCGGACGAGTATTCTTGGAGAAAGTATGGACAGAAACCGATCAAGGGCTCACCTTACCCTCGGGGATATTATAAGTGTAGCACCGTGAGAGGATGTCCGGCGAGGAAGCATGTGGAACGAGCTCAAGACGATCCTAAAATGCTCATCGTAACATATGAAGGAGAGCACCGTCATGCTCTGGAAGCGCGTGCGGCGGAGTGCGGTGGTGCAGGCATCGGTCTTAGCCTTCAAGCCAGCTGA 993 0.5206 MAVDLVGLPRKMEEQMAIQEAASAGLKSMEHLVRLLNSSQSSVSDNNPHRLDCTHLTDMTVSKFKQVINLLNRTGHARFRRAPSNNPNPRSSSSSPSAAPALPNPSQSNHLALNSAQSSHSQGLTLDFAKPCKVKTAPLKPSTELSGSQYSKDTFSISPPMSTTSSSFMSSITGDGSVSDGKIGPSLFPPPAPVSAGKPPLSSSHRKRCHDSAFHEKTSSSGHCHCSKRRKSRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHALEARAAECGGAGIGLSLQAS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4098g00024 330 FunFam WRKY transcription factor 65 235 312 - -
Pral4098g00024 330 MobiDBLite consensus disorder prediction 141 177 - -
Pral4098g00024 330 MobiDBLite consensus disorder prediction 79 118 - -
Pral4098g00024 330 Gene3D WRKY domain 239 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4098g00024 330 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4098g00024 330 MobiDBLite consensus disorder prediction 204 223 - -
Pral4098g00024 330 SUPERFAMILY WRKY DNA-binding domain 249 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4098g00024 330 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4098g00024 330 Pfam WRKY DNA -binding domain 253 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4098g00024 330 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 314 IPR044810 GO:0003700
Pral4098g00024 330 MobiDBLite consensus disorder prediction 138 230 - -
Pral4098g00024 330 MobiDBLite consensus disorder prediction 75 118 - -
Pral4098g00024 330 Pfam Plant zinc cluster domain 206 249 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4098g00024 Pral-Chr4098 210641 212180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4098g00024 1 309 WRKY Transcription Factor Family AT2G24570 56.832 1.88e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4098g00024 WRKY 3.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4098g00024 - - gmx:732587 354.369