Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4098g00018 ATGGTCAGTTTTGTGACTGCAGTGGAACCTCCTTCACATTCTCAAGTTATTCAGGTTTCCATGGCCCAGCTCAGTGGCTTCGGAGGATTTAAGTTTTTTGTGGTAGTCCTAGTAGTACTCATAATACTGATAGTTTTGTTAATCATGCTGCTCTTGTTTGCACGGGCAGAGGTAATGAAGATAATAGCTTCTTCAAAGAAGCAGCAAGGATCAGCAGACTTCTTTAGTGGCAGCGTTCAGGAAATGAGTTATTTTGACTATCAGACCCTGAAGAAGGCAACAATGAATTTTCATCCTGATAATCTTCTTGGAAGTGGTGGATATGGTCCTGTCTTTAGGGGGAAGTTGGCAGATGGAAGGCTAATTGCAGCGAAGACATTGAATCTGAACAAAGTACAACAAGGAGAAAAACAATTTCTGGCAGAAGTGAGACTCATTACAAGCATCCAACACAAAAATCTTGTTCGTCTCCTAGGATGCTGCATTGATGGGCCTCAAAGAATCCTTGTGTATGAATACATGAAGAACAGAAGTTTGGACCTCATACTCAATGCAGACAATAATCAGTTTCTGGATTGGAGCACTAGGTTCCAAATCATCCTTGGAATTGCACGGGCATTACAATACCTGCACGAGGATTCACACATGAGAATCGTTCACAGAGATATCAAAGCAAGCAATATTCTCCTTGATGACAAGTTTCACCCCAAGATCGGAGACTTTGGACTGGCTAGGTTCTTCCCCGAAGACCAAGATTGCCTCAGTACTCAGTTTGCTGGAACATTAGGTTATACGGCTCCTGAATATGCTACTAGAGGGGAACTATCAGAAAAGGTAGACATATACAGTTTTGGAGTTCTATTGCTTGAAATTATCAGTTGCAGAAAGAACACAGATTTTACTCTACCATCAGAAATGCAGTACCTTCCTGACTACGCATGGAAGCTTTATGAGAAATCGATGCTGATGGATCTGGTAGATCCAAAACTGCGAGCACACGGTTTTGCAGAGAAGGATGTAATGCAAGCAATTCATGTGGCATTGCTGTGTCTTCAATCTAGTGCAAATCTGAGGCCTCCCATGTCAGAAATTGTAGCATTGTTAACCTTCAAAATTGAAATGGTCACGACTCCAATGAGACCGATATTCCTTGATCGAAGGCACAAAATGGCTGCTGATGATTATGAGAATTAA 1194 0.4171 MVSFVTAVEPPSHSQVIQVSMAQLSGFGGFKFFVVVLVVLIILIVLLIMLLLFARAEVMKIIASSKKQQGSADFFSGSVQEMSYFDYQTLKKATMNFHPDNLLGSGGYGPVFRGKLADGRLIAAKTLNLNKVQQGEKQFLAEVRLITSIQHKNLVRLLGCCIDGPQRILVYEYMKNRSLDLILNADNNQFLDWSTRFQIILGIARALQYLHEDSHMRIVHRDIKASNILLDDKFHPKIGDFGLARFFPEDQDCLSTQFAGTLGYTAPEYATRGELSEKVDIYSFGVLLLEIISCRKNTDFTLPSEMQYLPDYAWKLYEKSMLMDLVDPKLRAHGFAEKDVMQAIHVALLCLQSSANLRPPMSEIVALLTFKIEMVTTPMRPIFLDRRHKMAADDYEN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4098g00018 397 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 27 390 - -
Pral4098g00018 397 Gene3D Phosphorylase Kinase; domain 1 56 173 - -
Pral4098g00018 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pral4098g00018 397 SMART serkin_6 97 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4098g00018 397 Pfam Protein kinase domain 98 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4098g00018 397 ProSiteProfiles Protein kinase domain profile. 97 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4098g00018 397 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 174 378 - -
Pral4098g00018 397 SUPERFAMILY Protein kinase-like (PK-like) 78 371 IPR011009 -
Pral4098g00018 397 CDD STKc_IRAK 103 369 - -
Pral4098g00018 397 Gene3D Transferase(Phosphotransferase) domain 1 174 377 - -
Pral4098g00018 397 FunFam Cysteine-rich receptor-like protein kinase 10 61 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4098g00018 Pral-Chr4098 125510 127584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4098g00018 39 384 Receptor kinase-like Gene Family AT1G56120 45.665 1.59e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4098g00018 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4098g00018 - - gmx:100799624 556.214