Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4098g00009 ATGATACCAACTTATCGCTGTTCACCAGCTGTGTCTTCTTCCATGTCTCATCAAAGCCATATTCAACCCTCTTCTTCATCTTCTTATCCTCCTGATGACCCCCATCATGATCAGTCACTGAATCGCTTGCAAACTTCTTATCACCAGGATATGATCCCAGATGCAGACCAGTGGAAGAAAGAGGATAAGAATGATCAAGTTAAGGAAGGATCAAGCAAGTGGAAGCCTTCAAAGATGAGAATGATGGTTCGGGAACAAAGTAAGCAGAGGTTTGAAGATCATCATCATCATCAGAAGCCCTTATCATCATCATCATTATCCTCATCAACTGACCATAATAACATGTGCAATAGAGCTTGTTCCTCGGATCAAACGTCTCATATCGGTGTTAGGGTTTGTGCTGATTGCCAGACCACTAAGACCCCTCTCTGGAGGAGTGGACCAACAGGCCCTAAGTCACTTTGCAACGCGTGTGGAATTCGGCAAAGGAAGGCGAGGCTTGCCATGGCGGCGGCGGCTTCTGCTCCGGTGAGGGAAAACAAGGTACAGAAGAAACAGGAGAAGAAGCCGCTGTTGAAGAAGAAGAAGAAGAAGAAGCGAAAGCTTGGAGTAGTGAAGCCATGTGGAGGTAGAAAGAAGCCTGTTTTGGAGGATTTTGCTACGAGGTTGAGCAAGAGCTTGTCTGCGCAACAAGTTCTATTCCCTCAGGACGAGAAGGAAGCTGCTATTCTGCTCATGGCTTTATCTTGTGGTCTTGTTCGTGGATAA 768 0.4622 MIPTYRCSPAVSSSMSHQSHIQPSSSSSYPPDDPHHDQSLNRLQTSYHQDMIPDADQWKKEDKNDQVKEGSSKWKPSKMRMMVREQSKQRFEDHHHHQKPLSSSSLSSSTDHNNMCNRACSSDQTSHIGVRVCADCQTTKTPLWRSGPTGPKSLCNACGIRQRKARLAMAAAASAPVRENKVQKKQEKKPLLKKKKKKKRKLGVVKPCGGRKKPVLEDFATRLSKSLSAQQVLFPQDEKEAAILLMALSCGLVRG 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4098g00009 255 ProSitePatterns GATA-type zinc finger domain. 133 158 IPR000679 GO:0006355|GO:0043565
Pral4098g00009 255 FunFam GATA transcription factor 21 127 206 - -
Pral4098g00009 255 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 130 170 - -
Pral4098g00009 255 MobiDBLite consensus disorder prediction 7 51 - -
Pral4098g00009 255 ProSiteProfiles GATA-type zinc finger domain profile. 131 163 IPR000679 GO:0006355|GO:0043565
Pral4098g00009 255 Gene3D - 130 203 IPR013088 GO:0006355|GO:0008270
Pral4098g00009 255 SMART GATA_3 127 178 IPR000679 GO:0006355|GO:0043565
Pral4098g00009 255 MobiDBLite consensus disorder prediction 1 110 - -
Pral4098g00009 255 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 17 254 - -
Pral4098g00009 255 MobiDBLite consensus disorder prediction 187 202 - -
Pral4098g00009 255 MobiDBLite consensus disorder prediction 53 100 - -
Pral4098g00009 255 Pfam GATA zinc finger 133 167 IPR000679 GO:0006355|GO:0043565
Pral4098g00009 255 CDD ZnF_GATA 132 164 IPR000679 GO:0006355|GO:0043565
Pral4098g00009 255 MobiDBLite consensus disorder prediction 176 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4098g00009 Pral-Chr4098 92153 93410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4098g00009 65 255 C2C2-Gata Transcription Factor Family AT4G26150 39.732 1.40e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral4098g00009 GATA 6.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4098g00009 - - pcin:129310140 176.792