Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4096g00010 ATGACGGAGCAGGAAAGGAAGCAGGAAGGATCAGGGAGGAAGGTGAAGAAGAGCTACTTCGATGTGGTCGGATTGTGCTGTTCCTCGGAGGTTCCGCTCATCGAAAACATCCTTAAACCTCTGGAAGGGATCAAAGAGGTGTCGGTCATCGTCCCTTCTCGAACCGTCATTGTCGTGCACGACACTACTCTCATTTCGCAGTTTCAAATTGCAAAGGCGCTGAACCAGGCAAGGCTGGAGGCTAACGTGAGGGTGTACGGGGACGAGAATGAGAAGCAGAAGCAGAAATGGCCGAGCCCTTACGCATTAGCGTCTGGTATATTGCTGGCTCTCTCACTATTCAAATACGTGTACGGTCCCCTCCAGTATGTGGCCTTGGCTGCCGTGGCTGCTGGCCTTCTTCCCATTCTTCTCAAAGCCCTCTCCTCTCTTCGCCGCCTTCATCTTGACATTAACATCCTCGTCCTCGTCGCAGTTGTGGGAACAATAGCCATGCATGATTATTTGGAAGCTGCCACCATTGTTTTCCTCTTCTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGTCACAAGGCAAGTGCGGCAATGTCATCGTTGATGAACATGGCTCCCCAGAAAGCGACCATTGCTGAAACAGGAGAGATTGTGGACGCCGACGAGGTCCAGGTGAACACCGTCCTAGCCGTTAAAGCAGGGGAAGTGATACCAATCGATGGAATTGTTGTAGACGGAACCTGTGAAGTCGATGAGAAAACTTTGACTGGCGAGTCATTCCCTGTACCCAAACAAAAGGACTCTACTGTGTGGGCCGGCACTATCAATCTAAATGGTTATATTAGTGTAAAAACTAACGCACTAGCTGAGGATTGCGTGGTGGCCAAAATGGCTAAGCTAGTGGAAGAAGCACAAAACAGTAAAACCAGGAGCCAGAGACTGATAGACGAGTTTGCCAAGTTTTATACTCCAGCTGTTGTAATCACATCAACTCTTATAGCGGTGATTCCAGTTTTATTTAGAGTACATAATGTGAAACATTGGCTTCACTTTGCACTTGTCGTTCTAGTAAGTGCATGTCCATGCGCCCTTGTCCTTTCTACGCCAGTTGTGACTTTCTGTGCGTACACAAAAGCAGCCACATCAGGTCTTCTCATCAAAGGGGGTGATTACCTGGAAACCCTTGCAAAAGTTAAGGTCATGGCCTTTGACAAAACTGGAACTATTACAAAGGGTGAATTTATGGTGACGAATTTCCAATCTCTTTGTGATGATGTAGATTTGAAAACGTTGGTTTACTGGGTCTCAAGCATCGAAAGTAAGTCAAGTCATCCATTGGCAGCAGCAGTTATCGACTATGGAAAGTCGCTTTCTATTGATCCTAAGCCAGAAGAGGTGACAGACTATGAAAATTTTCCTGGAGAAGGTATTTGTGGAAAAATTGATGAGAGATATGTTTACATTGGAAATAGAAAAATTGCTGCTAGAGCTGAGTCTAAGACAGTTCCTACCTTAGAAGGTGGCTCTCAGGGGGGAAAGACTATTGGCTATATATACTCAGGAGCAACTCCAATTGGAGTTTTCTCTCTTTCAGATGCTTGCCGAGCTGGGGTAGTGGAGGCTATAGGGCAGCTAAAGTCATTGGGTATCAAAACCTCTATGCTTACCGGAGATAGCCATGCAGCTGCCATGCAGGCTCAAGAGCAGCTAGGGCATACTTTGGAGCAAGTCCACGCAGAACTTTTGCCAGAAGGAAAAGCAAAAATCATCACAGAATTCAAAAAGGAAGGACCAACAGCCATGGTTGGAGATGGTGTGAATGATGCACCAGCATTAGCTGCAGCTGATATTGGCATTTCAATGGGCATTTCAGGTTCTGCACTAGCAAGTGAAACAGGAAATATAATTCTCATGTCAAATGACATGAGGAAGATACCAAAAGCGATCAAGCTTGCAAGAAAATCTCGTAGGAAAGTAATAGAAAATATTATATTGTCAATTGTGACTAAGGCTGCAATTCTTGGCTTGGCCATTGCTGGTCATCCGCTTGTTTGGGCAGCAGTTCTTGCTGATGTTGGGACATGCTTGTTGGTAATCTTAAACAGCATGCTTCTTCTGCACAGAAGAGAGAAGCATAGAGGAAAATGTTGTAGATCTTCCACTCAGCTACACGTCCGTAAAAGTGGGTGTCATGCCAATAATGGCAAATCTTCTCACCACCACCACCACCACCACCCCCATCATCAACACAAGCATGATTCTCATCAGCATTCTAAAATCACTGAAGGCCATGACCAATGCAAGTCCAGAGATGAGATCCATGAACCAAATCTCTGTCATCATGGAAGACGTGAGACAGGTAATGTCCAACCACATGATGGAGAAAGCCAGAGCTGTTCACGCTTTCAAGATAGGATAATGATTGAAGCAGATAAGTGTACTACTTCAACAGACAGTCATGGCAGTTGTTTGGAACATAGTAACTCCCACAGCACAGCACATTTCCTGAATAGAAATTGTGACACAATCTTTCATGATGGAGTGTCACCAGGTTCTCCCTGCCATTTCTTGCACTCACATGATATAGAAAGCCAGGCTTGTTCAGGGTCTCCTCACATGATTCTGACCCGATCAGATAAATGTTCGAGTGCAATGGATAATCATGATTGTATGGAACATAATTCCCACGAGACATTACATTGCCACAACAGAAGCTGTGGCCAAGTCAGTCATGTTGAGGCATCAGTTGTTTCTCCCTGCCACTTCAATCTTTCTGCAGAGAAAGAAAGCCAACAGTGCAGCAATAAACACTGCCACTTGATCACTGATTTTGAAATTCCTGAGGATCATAATCTCAGAAAGACAATAAGATGCAATCATGAAATTAAGCATCAAATTCCAGGGCCTCTATCTGACTTTAAGGTCTGTGGAGACGATCATGTAGCTGGTATCATGGAACATAAGCACATTGAATCAGCCTCAATGCACGCTTTTGGGAATTCGGAAGAGCAAGAAAAAGGTTCTTGTTGCAAAAGCTGTCCAGACGAATGTAACGAATGTCCTGTTGTGTGCGCGCATCTGTCTTCAAATGAGATAGAAGTTGGTGCATGTTGTGAGGGCTCTTCAAGGGAACCCATTGAGTTTCCAATGGCGCATGCTTGTATTAGTTTGGACAAGAGAAATATTGGTGGGTGTTGCAAGAGCTACATGAAGGAATGCTGTAGCAAGCATGGGCGTTTAGGGGTGGGTTTTGGAGGTTTATCCGAAATTATTACAGAACAGGTGTAG 3282 0.4497 MTEQERKQEGSGRKVKKSYFDVVGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHDTTLISQFQIAKALNQARLEANVRVYGDENEKQKQKWPSPYALASGILLALSLFKYVYGPLQYVALAAVAAGLLPILLKALSSLRRLHLDINILVLVAVVGTIAMHDYLEAATIVFLFSIAEWLESRASHKASAAMSSLMNMAPQKATIAETGEIVDADEVQVNTVLAVKAGEVIPIDGIVVDGTCEVDEKTLTGESFPVPKQKDSTVWAGTINLNGYISVKTNALAEDCVVAKMAKLVEEAQNSKTRSQRLIDEFAKFYTPAVVITSTLIAVIPVLFRVHNVKHWLHFALVVLVSACPCALVLSTPVVTFCAYTKAATSGLLIKGGDYLETLAKVKVMAFDKTGTITKGEFMVTNFQSLCDDVDLKTLVYWVSSIESKSSHPLAAAVIDYGKSLSIDPKPEEVTDYENFPGEGICGKIDERYVYIGNRKIAARAESKTVPTLEGGSQGGKTIGYIYSGATPIGVFSLSDACRAGVVEAIGQLKSLGIKTSMLTGDSHAAAMQAQEQLGHTLEQVHAELLPEGKAKIITEFKKEGPTAMVGDGVNDAPALAAADIGISMGISGSALASETGNIILMSNDMRKIPKAIKLARKSRRKVIENIILSIVTKAAILGLAIAGHPLVWAAVLADVGTCLLVILNSMLLLHRREKHRGKCCRSSTQLHVRKSGCHANNGKSSHHHHHHHPHHQHKHDSHQHSKITEGHDQCKSRDEIHEPNLCHHGRRETGNVQPHDGESQSCSRFQDRIMIEADKCTTSTDSHGSCLEHSNSHSTAHFLNRNCDTIFHDGVSPGSPCHFLHSHDIESQACSGSPHMILTRSDKCSSAMDNHDCMEHNSHETLHCHNRSCGQVSHVEASVVSPCHFNLSAEKESQQCSNKHCHLITDFEIPEDHNLRKTIRCNHEIKHQIPGPLSDFKVCGDDHVAGIMEHKHIESASMHAFGNSEEQEKGSCCKSCPDECNECPVVCAHLSSNEIEVGACCEGSSREPIEFPMAHACISLDKRNIGGCCKSYMKECCSKHGRLGVGFGGLSEIITEQV 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4096g00010 1093 Gene3D - 12 85 - -
Pral4096g00010 1093 SUPERFAMILY Calcium ATPase, transduction domain A 214 299 IPR008250 -
Pral4096g00010 1093 Pfam E1-E2 ATPase 204 378 - -
Pral4096g00010 1093 ProSitePatterns E1-E2 ATPases phosphorylation site. 402 408 IPR018303 -
Pral4096g00010 1093 PRINTS H+-transporting ATPase (proton pump) signature 600 616 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4096g00010 1093 PRINTS H+-transporting ATPase (proton pump) signature 632 657 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4096g00010 1093 NCBIfam heavy metal translocating P-type ATPase 151 703 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pral4096g00010 1093 Coils Coil 295 315 - -
Pral4096g00010 1093 FunFam Copper-transporting ATPase 1, putative 189 303 - -
Pral4096g00010 1093 PRINTS P-type cation-transporting ATPase superfamily signature 600 619 - -
Pral4096g00010 1093 PRINTS P-type cation-transporting ATPase superfamily signature 400 414 - -
Pral4096g00010 1093 PRINTS P-type cation-transporting ATPase superfamily signature 524 535 - -
Pral4096g00010 1093 PRINTS P-type cation-transporting ATPase superfamily signature 546 556 - -
Pral4096g00010 1093 PRINTS P-type cation-transporting ATPase superfamily signature 624 636 - -
Pral4096g00010 1093 PRINTS P-type cation-transporting ATPase superfamily signature 249 263 - -
Pral4096g00010 1093 SFLD p-type atpase 383 652 IPR044492 -
Pral4096g00010 1093 NCBIfam cadmium family heavy metal-translocating P-type ATPase 151 492 - -
Pral4096g00010 1093 SFLD Haloacid Dehalogenase 383 652 - -
Pral4096g00010 1093 MobiDBLite consensus disorder prediction 753 788 - -
Pral4096g00010 1093 MobiDBLite consensus disorder prediction 731 752 - -
Pral4096g00010 1093 FunFam Putative cadmium/zinc-transporting ATPase 3 411 532 - -
Pral4096g00010 1093 CDD P-type_ATPase_HM 102 702 - -
Pral4096g00010 1093 Pfam haloacid dehalogenase-like hydrolase 396 614 - -
Pral4096g00010 1093 ProSiteProfiles Heavy-metal-associated domain profile. 16 82 IPR006121 GO:0046872
Pral4096g00010 1093 MobiDBLite consensus disorder prediction 726 795 - -
Pral4096g00010 1093 FunFam Putative cadmium/zinc-transporting ATPase 3 12 85 - -
Pral4096g00010 1093 Gene3D - 188 303 - -
Pral4096g00010 1093 SUPERFAMILY Calcium ATPase, transmembrane domain M 151 394 IPR023298 -
Pral4096g00010 1093 SUPERFAMILY HMA, heavy metal-associated domain 14 82 IPR036163 GO:0046872
Pral4096g00010 1093 Gene3D - 391 651 IPR023214 -
Pral4096g00010 1093 Gene3D - 411 532 IPR023299 GO:0000166
Pral4096g00010 1093 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 13 706 - -
Pral4096g00010 1093 SUPERFAMILY HAD-like 399 701 IPR036412 -
Pral4096g00010 1093 NCBIfam HAD-IC family P-type ATPase 507 676 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4096g00010 1093 NCBIfam HAD-IC family P-type ATPase 174 420 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4096g00010 Pral-Chr4096 115904 125125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4096g00010 11 719 Primary Pumps ATPases AT4G30110 70.141 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4096g00010 K01534 - gmx:100817567 1328.92