Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4096g00006 ATGGCAGCGATAAGACTGAAAGGAAGCCACACCGTGAGGCCTTGTGATCCTACGTGGATTGGAACAATGGCGTTATCTGAATGGGATCAAATAGGTTGCGTCACCCACGTTCCCGCCATTTACTTGTATCGATCCCCAAACAGATCGGCTTCCGCCATTGCCGAGACCTTGAAGGACTCGTTAAGCAAAGTGTTGGTGCCGTTTTACCCCTTGGCCGGTCGTTTGCAGTGGATAGGCAATGGCCGTCTTCAGCTTCAGTGTAACGCCATGGGAGCTCGCTTCATTGAAGCTGAGTGCGAATCGAGTCTAAACGACATTGGCGACTTGTTTCTCTCCCCTCAACATCGTAACCTCTTCCCATCTGCAGATTATGGCCTCCCCATTCATGAGCTTCCTCTGTTTCTGGTTCAACTCACCACCTTCAGATGCGGTGGCGTCACCATCGCAATTGCTCTTTCTCACGCCGTTGCAGATGGACCAGCTGCCCTTCACTTCATGTCTGAGTGGGCTAGGATTACAAGAGGCGAGACACTACAAACGCCACCTTTTCATGACCGGAGCGTCTTCCGAGCCGGGCAGCCACCGTTGGCGTCGTCACCGCGGCCAACCCTCGACGATTTCCCAGAGTATGGCAAGCCCGCGTTACTACTTGGTCAATCAGATACTTCAGAGGAAAGGAAGAAGAAAACCACAACAGCTATGCTGAAGATAACAAAAGCCCAAGTTGAGAAGTTGAGGAAGATGGCGAATGACAGTAGGGAAAAGCCCATGGCTCGTGGGTTCACTCGATACGAGACGATTTGTGGACATGTTTGGAGAATCTCATGCAAGGCAAGAGGACACAGAAAGCAGCAGCCAACCGCAATGGGTATTATTATTGATTCAAGGAGTCGCATGAGGCCTGAACTGCCAAGAGAGTTCTTTGGAACTGCAACTTTTGATGTGATAGCTCAGAGCATGGCAGGTGATCTCATGTCGAAGCCATTAGGGTTTGCTGCGAGTAAAGTGAGGGAAACAATAGAGAAGGTGACAGACAACTACGTGAGGTCGTCGATAGAGTTCTTGAAGAACCAGAAGGACTTGAAAGACTTTCAAGATATACATTCATTGTTAAGGAAAGAGGAAGGACCGTTTTATGGAAACCCTAATATTACAGTGGTGAGTTGGCTGACGTTGCCTTTATATGGGTTTGATTTTGGGTGGGGAAAGGAACAGTACATGGGACCTGGACCTTATGAAGATGATGGAAATTGTTTGCTTATGCACAGCCCTGAAGGAGATGGTTCTGTTGTGGTTGCTATGTGCCTTCAGGAAGCTCATATGGATGAGTTTAAGAAGCTTTTTTATCAAGACTTGCTGTGA 1362 0.4853 MAAIRLKGSHTVRPCDPTWIGTMALSEWDQIGCVTHVPAIYLYRSPNRSASAIAETLKDSLSKVLVPFYPLAGRLQWIGNGRLQLQCNAMGARFIEAECESSLNDIGDLFLSPQHRNLFPSADYGLPIHELPLFLVQLTTFRCGGVTIAIALSHAVADGPAALHFMSEWARITRGETLQTPPFHDRSVFRAGQPPLASSPRPTLDDFPEYGKPALLLGQSDTSEERKKKTTTAMLKITKAQVEKLRKMANDSREKPMARGFTRYETICGHVWRISCKARGHRKQQPTAMGIIIDSRSRMRPELPREFFGTATFDVIAQSMAGDLMSKPLGFAASKVRETIEKVTDNYVRSSIEFLKNQKDLKDFQDIHSLLRKEEGPFYGNPNITVVSWLTLPLYGFDFGWGKEQYMGPGPYEDDGNCLLMHSPEGDGSVVVAMCLQEAHMDEFKKLFYQDLL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4096g00006 453 Gene3D - 3 204 IPR023213 -
Pral4096g00006 453 FunFam Tryptamine hydroxycinnamoyl transferase 218 449 - -
Pral4096g00006 453 Gene3D - 219 451 IPR023213 -
Pral4096g00006 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 449 - -
Pral4096g00006 453 Pfam Transferase family 4 449 - -
Pral4096g00006 453 Coils Coil 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4096g00006 Pral-Chr4096 68969 70641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4096g00006 4 450 Monolignol Biosynthesis Gene Families AT5G48930 36.242 4.32e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4096g00006 K13065 - pop:7489456 568.54