Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4096g00004 ATGAAAGTGAACATGCCAACAGTAGCATTCAAAGGCAGCTACACCGTAAAGCCTTCTGAACCAACGTGGATTGGAAGCATGGGCTTGTCTGAATGGGATCAAACAAGCTGCTTGACTCACGTTCCCGTCATCTACTTCTACCTACCACCAGGCTCCTGGCTTTCGCCGCCAACCGCCATTGCCGACACCTTGAAACACTCTTTAAGCCGAGCCTTGGTGCCGTTTTATCCCTTGGCCGGTCGTTTGCAGTGGATCGGCCACGGACGACTTCTGCTTCACTGCAACGCAGCGGGGGCTCGGTTCATCGAAGCCGAGTGCGATTCAAATTTGGACGACCTTGTTGACTCGTCCCTGTCCTTTCAGCCCAGTGAGCTTCACCCCTCCGTAGATTACAGCCTCCCAATTGATGAGCTTCCTCTGTGTTTGGTTCAGCTCACCAGGTTTAAGTGCGGTGGCCTCGGCATAAGTATAGCAATTTCTCACGCAGTCGTTGATGGACCAGCTGCATTTCACTTCATCTCTGAATGGGCAAGGCTAGCAAGAGACGAGCCTCTACAAGTAACCCCATTTCTTGACCGGAGTGTGTTTCGAGCTGCACAACCGCCTTTAGCACGGGCGCCACCGAGCCTGGACGATTACCCGCAGTATGGGAGGCTACCGTTATTAGTTGGACAGTGGGACAATTTAGAGGAAAGAGAGAAGAAAACCACAAAGACAATGTTGAAGATCAGCAAGTCTCAGATGGAGCAGCTGAAAAAGATGGGTGGTGGGTTCTCTCGGTACGAGACTATATCTGGACATATGTGGAGAACCGCGTGCAAGGCAAGAGGACTCAAAATGGAACAACCAACATCATTAGTTATTGTCGTCGATTCGAGGAGCCGCATGAGGCCTCAACTACCAAGAGAGTTCTTTGGCACTGCAACTTTTGATGTGATAGCTCAAAGCGTGGTGGGCGATCTCTTGTCAAAACCATTAGGATTCGCTGCAAGGAAAGTAAGAGAAGCAGTTCAGAAGGTGACGGATGAGTATGTACGGTCTGGCATAGAGCTGTTAAAAAGCCAAAAGGACCTCACAAAGTTTCAAGATATCCACAAAGAAGGGCCACCCTTCCTTGGAAACCCTAATTTTGAGGTAGTAAGTTGGCTGACACTGCCCATGGATGGGTTTGACTTTGGGTGGGGGAAGGAGGTATCCATGGGGCTAGGATCTCATATGCTAGACGGCAATTCCGTGCTTCTTCCAAGCCCTGAAGGGGATGGTTCTGTTGTGGTTGCTTTGTGCTTCCAGGTGGATCATATGGACGCGTTTAAGAAACACTTTTATGAGGACATGATCTGA 1341 0.4989 MKVNMPTVAFKGSYTVKPSEPTWIGSMGLSEWDQTSCLTHVPVIYFYLPPGSWLSPPTAIADTLKHSLSRALVPFYPLAGRLQWIGHGRLLLHCNAAGARFIEAECDSNLDDLVDSSLSFQPSELHPSVDYSLPIDELPLCLVQLTRFKCGGLGISIAISHAVVDGPAAFHFISEWARLARDEPLQVTPFLDRSVFRAAQPPLARAPPSLDDYPQYGRLPLLVGQWDNLEEREKKTTKTMLKISKSQMEQLKKMGGGFSRYETISGHMWRTACKARGLKMEQPTSLVIVVDSRSRMRPQLPREFFGTATFDVIAQSVVGDLLSKPLGFAARKVREAVQKVTDEYVRSGIELLKSQKDLTKFQDIHKEGPPFLGNPNFEVVSWLTLPMDGFDFGWGKEVSMGLGSHMLDGNSVLLPSPEGDGSVVVALCFQVDHMDAFKKHFYEDMI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4096g00004 446 Gene3D - 4 209 IPR023213 -
Pral4096g00004 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 441 - -
Pral4096g00004 446 Pfam Transferase family 8 443 - -
Pral4096g00004 446 Gene3D - 225 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4096g00004 Pral-Chr4096 48924 50590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4096g00004 1 443 Monolignol Biosynthesis Gene Families AT5G48930 37.029 2.18e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4096g00004 K13065 - fve:101295724 538.495