Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4095g00002 ATGGAGGGTTTGGCAGTTAAACGCAGACGGGTTTACTCTGTGGAACCAAACAGAATAGCCGAAGCAGCGTTTGCGAGGAAGTACGTGAGCTATCTAGTTCCAGCCTTGACGAAGATGAAGGAAAGCACTGAGAGTGATTCAGTCAAGAAGGCTGTGAAGTACGAAGTGGACATGGCTCTGGTTTTGTCAGCTCAGGGTTCTGCATGGAGCCACGCCCTAAAACTCAGTCTCCAGCAACAAAACGTCGTCCTCAATAATGGAGCACTGTCTTCTTCTTCCTCATCAGCATCAACCACAACCAAGAAAGCCGCCATGGTGAACGAGTGTGATCAGAATCTGAGGATGGCAGCGGCTGCAGACCACGACGGAGAAGATGGCGGCGGCGGTGAGGAGAAGGAGGCGATGAGGAGGCTAAGAAGATTGGTCCCAGGAGGAGAAGAGATATGCAATGACCAAGAAATGCTTGCAGAGTTGAAGAGTTATGTCAGGTGTCTGCAAATGCAGGTCAATATTCTGCAGTGTCTGGCCCAGTCTCATTCATTTTAA 546 0.4982 MEGLAVKRRRVYSVEPNRIAEAAFARKYVSYLVPALTKMKESTESDSVKKAVKYEVDMALVLSAQGSAWSHALKLSLQQQNVVLNNGALSSSSSSASTTTKKAAMVNECDQNLRMAAAADHDGEDGGGGEEKEAMRRLRRLVPGGEEICNDQEMLAELKSYVRCLQMQVNILQCLAQSHSF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4095g00002 181 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 23 177 IPR044660 GO:0006355
Pral4095g00002 181 CDD bHLH_AtIBH1_like 132 176 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4095g00002 Pral-Chr4095 15544 16089 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4095g00002 7 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 36.782 2.55e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4095g00002 - - pcin:129307732 223.016